BLASTX nr result

ID: Cephaelis21_contig00018107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018107
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group] g...    65   4e-09
sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA ...    65   4e-09
gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japo...    65   4e-09
gb|EEC70114.1| hypothetical protein OsI_00773 [Oryza sativa Indi...    65   4e-09
tpg|DAA38632.1| TPA: hypothetical protein ZEAMMB73_690745 [Zea m...    65   8e-09

>ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group]
           gi|56201772|dbj|BAD73222.1| RNA-dependent RNA polymerase
           -like [Oryza sativa Japonica Group]
           gi|56201879|dbj|BAD73329.1| RNA-dependent RNA polymerase
           -like [Oryza sativa Japonica Group]
           gi|113531835|dbj|BAF04218.1| Os01g0198000 [Oryza sativa
           Japonica Group] gi|215693837|dbj|BAG89036.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 582

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +1

Query: 7   RMIFAGIPLNESYLQKRLSEMAMFQTNLLKEGKLPINESFCLMGTADPTGLLNKN 171
           RMI +GIPL ESYLQ RL  +++ +   +K GK+PI++ + LMGTADPTG L  N
Sbjct: 154 RMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPN 208


>sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=OsRDR4
          Length = 1183

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +1

Query: 7   RMIFAGIPLNESYLQKRLSEMAMFQTNLLKEGKLPINESFCLMGTADPTGLLNKN 171
           RMI +GIPL ESYLQ RL  +++ +   +K GK+PI++ + LMGTADPTG L  N
Sbjct: 755 RMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPN 809


>gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japonica Group]
          Length = 1148

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +1

Query: 7   RMIFAGIPLNESYLQKRLSEMAMFQTNLLKEGKLPINESFCLMGTADPTGLLNKN 171
           RMI +GIPL ESYLQ RL  +++ +   +K GK+PI++ + LMGTADPTG L  N
Sbjct: 720 RMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPN 774


>gb|EEC70114.1| hypothetical protein OsI_00773 [Oryza sativa Indica Group]
          Length = 1172

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +1

Query: 7   RMIFAGIPLNESYLQKRLSEMAMFQTNLLKEGKLPINESFCLMGTADPTGLLNKN 171
           RMI +GIPL ESYLQ RL  +++ +   +K GK+PI++ + LMGTADPTG L  N
Sbjct: 731 RMILSGIPLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPN 785


>tpg|DAA38632.1| TPA: hypothetical protein ZEAMMB73_690745 [Zea mays]
          Length = 462

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = +1

Query: 7   RMIFAGIPLNESYLQKRLSEMAMFQTNLLKEGKLPINESFCLMGTADPTGLLNKN 171
           RMI +GIPL E YL  RLS MA  +  + +EGKLPI+E + LMGT DPTG L  N
Sbjct: 38  RMIHSGIPLEEPYLLSRLSFMAKQEMKVFREGKLPIDECYYLMGTTDPTGTLKPN 92


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