BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00018075
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   110   1e-22
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]    99   3e-19
gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]    99   3e-19
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]    99   3e-19
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]    99   3e-19

>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|32305282|gb|AAP78924.1| putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/99 (52%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = -3

Query: 295 WAGCMKAIKDCENYKEGMNSS--EEICKYISGTFKPSEKNYHITEKETLAALRVFEKWRI 122
           WAGC+KA +    + +G  +   E +CKY SG F  +E+ Y + EKETLAAL+   KW+ 
Sbjct: 518 WAGCLKAAELL--FPKGTKNKVVERLCKYTSGIFSSAEQKYTVHEKETLAALKTMRKWKA 575

Query: 121 DLLPKLFTLRTDSAYLTNFCRYQFKGNYKQGRLLRWQLQ 5
           +LLPK FTLRTDS+Y+T F R+  K NY QGRL+RWQL+
Sbjct: 576 ELLPKEFTLRTDSSYVTGFARHNLKANYNQGRLVRWQLE 614


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -3

Query: 232 EEICKYISGTFKPSEKNYHITEKETLAALRVFEKWRIDLLPKLFTLRTDSAYLTNFCRYQ 53
           E + KY SGTF  +EK Y I E ETLA L+ F KW++DLL K F L+TDS Y+T F RY+
Sbjct: 553 ELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKYVTGFLRYK 612

Query: 52  FKGNYKQGRLLRWQLQL 2
            K NY QGRL+RWQL+L
Sbjct: 613 IKANYNQGRLIRWQLEL 629


>gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -3

Query: 232 EEICKYISGTFKPSEKNYHITEKETLAALRVFEKWRIDLLPKLFTLRTDSAYLTNFCRYQ 53
           E + KY SGTF  +EK Y I E ETLA L+ F KW++DLL K F L+TDS Y+T F RY+
Sbjct: 553 ELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKYVTGFLRYK 612

Query: 52  FKGNYKQGRLLRWQLQL 2
            K NY QGRL+RWQL+L
Sbjct: 613 IKANYNQGRLIRWQLEL 629


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -3

Query: 232 EEICKYISGTFKPSEKNYHITEKETLAALRVFEKWRIDLLPKLFTLRTDSAYLTNFCRYQ 53
           E + KY SGTF  +EK Y I E ETLA L+ F KW++DLL K F L+TDS Y+T F RY+
Sbjct: 576 ELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLTKPFILKTDSKYVTGFLRYK 635

Query: 52  FKGNYKQGRLLRWQLQL 2
            K NY QGRL+RWQL+L
Sbjct: 636 IKANYNQGRLIRWQLEL 652


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -3

Query: 232 EEICKYISGTFKPSEKNYHITEKETLAALRVFEKWRIDLLPKLFTLRTDSAYLTNFCRYQ 53
           E + KY SGTF  +EK Y I E ETLA L+ F KW++DLL K F L+TDS Y+T F RY+
Sbjct: 563 ELLTKYASGTFTDTEKRYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKYVTGFLRYK 622

Query: 52  FKGNYKQGRLLRWQLQL 2
            K NY QGRL+RWQL+L
Sbjct: 623 IKANYNQGRLIRWQLEL 639