BLASTX nr result

ID: Cephaelis21_contig00017611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017611
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   240   8e-61
ref|XP_002527599.1| rnf5, putative [Ricinus communis] gi|2235330...   234   3e-59
gb|AEB69786.1| MAKIBISHI 1 [Medicago truncatula]                      230   8e-58
gb|AFK42054.1| unknown [Lotus japonicus]                              225   3e-56
ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-...   221   3e-55

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  240 bits (612), Expect = 8e-61
 Identities = 137/259 (52%), Positives = 168/259 (64%), Gaps = 8/259 (3%)
 Frame = +3

Query: 417  PSIHFQYEEEED-SVKQKSNPIPAPALASENVNGCFDCNICLDSAHDPVVTLCGHLYCWP 593
            P +  Q+E + D S+++K   I A   ASEN NG FDCNICLDSAHDPVVTLCGHLYCWP
Sbjct: 8    PELAAQHESDGDVSLQKKWKAISASEAASENSNGSFDCNICLDSAHDPVVTLCGHLYCWP 67

Query: 594  CIYKWLQVQNSSSVDTGDQPTCPVCKTYISNSSVVPLYGRGTSSAEYESRKRQLDLAIPH 773
            CIYKWL VQ++S V T  Q  CPVCK  IS++S+VPLYGRG S +E E++K  +  AIP 
Sbjct: 68   CIYKWLHVQSTSPV-TEQQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPR 126

Query: 774  RPPAIG--TNAQPSDAASVGSYPHQQLHPNLFNXXXXXXXXXXXXXXXXXXXHQQPYFSH 947
            RPPA G  T    + +AS+ S+P + LHPN F                    H Q YF H
Sbjct: 127  RPPAHGVHTLITTTTSASLNSHPSRHLHPNPFQ------------------SHSQ-YFPH 167

Query: 948  PFGSYASMGQYGFGNTVMTSPTIGMFGEMVFSGIFGSSGTNLFASSYP-TY----SSPRR 1112
            P+G YA+        T + +PTIGMFGEMVFS +FGSS T+LFA  YP TY    S+  R
Sbjct: 168  PYGGYAATPTL----TSVLNPTIGMFGEMVFSRMFGSSDTSLFAYPYPNTYPLMASANPR 223

Query: 1113 MRRQELQVEKSLRRVSIFL 1169
            MRRQE+Q+++ L RVSIFL
Sbjct: 224  MRRQEMQLDRCLNRVSIFL 242


>ref|XP_002527599.1| rnf5, putative [Ricinus communis] gi|223533016|gb|EEF34780.1| rnf5,
            putative [Ricinus communis]
          Length = 265

 Score =  234 bits (598), Expect = 3e-59
 Identities = 132/268 (49%), Positives = 168/268 (62%), Gaps = 13/268 (4%)
 Frame = +3

Query: 408  FSEPSIHFQYEEEEDSVKQKSNPIPAPALASENVNGCFDCNICLDSAHDPVVTLCGHLYC 587
            F E  +HF  EE+  +VKQK   + A    SE+ + CF CNICLDSA+DPVVTLCGHLYC
Sbjct: 5    FFEHDMHFDAEEDL-TVKQKWKSVSAATGLSEDDDDCFSCNICLDSANDPVVTLCGHLYC 63

Query: 588  WPCIYKWLQVQNSSS--VDTGDQPTCPVCKTYISNSSVVPLYGRGTSSAEYESRKRQLDL 761
            WPCIYKWLQV+ +SS   +   QP+CPVCK  IS++S+VPLYGRGTS +  E++K  +D 
Sbjct: 64   WPCIYKWLQVKRTSSDVDEQQQQPSCPVCKANISSNSMVPLYGRGTSQSNSETKKGSVDA 123

Query: 762  AIPHR-PPAIGTNAQPSDAASVGSYPHQQLHPNLFNXXXXXXXXXXXXXXXXXXXHQQPY 938
            AIP R PPA+ T+   +   S      QQLHPN F                    H Q Y
Sbjct: 124  AIPRRPPPAMNTSITNTSQLS------QQLHPNFFQ---------SHSQSQPQSFHHQRY 168

Query: 939  FSHPFGSYASMGQYGFGNTVMT---SPTIGMFGEMVFSGIFGSSGTNLFASSYP------ 1091
            F+  +G Y ++     G   MT   SP IGMFGE++FS  FG+S T+LFA SYP      
Sbjct: 169  FTDRYGGYGALASTNLGAAAMTQIFSPMIGMFGELIFSRTFGTSNTSLFAYSYPNSNSLM 228

Query: 1092 -TYSSPRRMRRQELQVEKSLRRVSIFLV 1172
             +Y+SP RMRRQE+Q+E+SL RV+IFL+
Sbjct: 229  GSYNSP-RMRRQEMQLEQSLNRVTIFLL 255


>gb|AEB69786.1| MAKIBISHI 1 [Medicago truncatula]
          Length = 250

 Score =  230 bits (586), Expect = 8e-58
 Identities = 125/246 (50%), Positives = 150/246 (60%), Gaps = 3/246 (1%)
 Frame = +3

Query: 444  EEDSVKQKSNPIPAPALASENVNGCFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVQN 623
            +E S+KQK          S   N CFDCNICL+SA+DPVVTLCGHLYCWPCIYKWL VQ 
Sbjct: 10   DEVSLKQKWKSTTEDTTISSGENNCFDCNICLESANDPVVTLCGHLYCWPCIYKWLNVQ- 68

Query: 624  SSSVDTGDQPTCPVCKTYISNSSVVPLYGRGTSSAEYESRKRQLDLAIPHRPPAIGTNAQ 803
            SSSV+   QPTCPVCK  IS++S+VPLYGRG S++E ES K Q+ L IPHRPP    NA 
Sbjct: 69   SSSVEPDTQPTCPVCKAVISHTSLVPLYGRGKSNSETESNKLQVGLGIPHRPPPYNLNAL 128

Query: 804  PSDAASVGSYPHQQLHPNLFNXXXXXXXXXXXXXXXXXXXHQQPYFSHPFGSYASMGQYG 983
             +          QQLHPN F                    H Q Y  H +G + + G + 
Sbjct: 129  LTSNRPSNLRHEQQLHPNYFQ-------------SQSRPIHYQHYIPHLYGGHGANGLHY 175

Query: 984  FGNTVMTS---PTIGMFGEMVFSGIFGSSGTNLFASSYPTYSSPRRMRRQELQVEKSLRR 1154
             G   MTS   P +G+FGEMV + +FG S  NLFA      +SP RMRRQE+Q++KSL R
Sbjct: 176  LGGAAMTSFVNPVMGLFGEMVSTRMFGVSDANLFAYPRNGSTSP-RMRRQEMQIDKSLNR 234

Query: 1155 VSIFLV 1172
            VSIFL+
Sbjct: 235  VSIFLL 240


>gb|AFK42054.1| unknown [Lotus japonicus]
          Length = 248

 Score =  225 bits (573), Expect = 3e-56
 Identities = 124/245 (50%), Positives = 154/245 (62%), Gaps = 3/245 (1%)
 Frame = +3

Query: 447  EDSVKQKSNPIPAPALASENVNGCFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVQNS 626
            E S KQK     A +  S + NGCFDCNICL+SAHDPVVTLCGHLYCWPCIYKWL VQ S
Sbjct: 11   EVSPKQKLKSTSAESPISSSDNGCFDCNICLESAHDPVVTLCGHLYCWPCIYKWLSVQ-S 69

Query: 627  SSVDTGDQPTCPVCKTYISNSSVVPLYGRGTSSAEYESRKRQLDLAIPHRPPAIGTNAQP 806
            SS +   Q TCP+CK  IS++S+VPLYGRGTS++E ES+K Q+ L IP RPP    NA  
Sbjct: 70   SSAEPDQQQTCPICKAEISHTSLVPLYGRGTSNSESESKKLQMGLGIPQRPPPYNLNAML 129

Query: 807  SDAASVGSYPHQQLHPNLFNXXXXXXXXXXXXXXXXXXXHQQPYFSHPFGSYASMGQYGF 986
            +   +   +  +QL+P+ F+                   +QQ Y    +G++ + G    
Sbjct: 130  TSNRASNPHLGEQLYPSYFH------------SQSQPLHYQQHYL---YGTHGANGLPYL 174

Query: 987  GNTVMTS---PTIGMFGEMVFSGIFGSSGTNLFASSYPTYSSPRRMRRQELQVEKSLRRV 1157
            G T MTS   P IGMFGEMV + IFG S  NLF   +    SP RMRRQE+Q++KSL RV
Sbjct: 175  GGTAMTSFFNPVIGMFGEMVLTRIFGVSDANLFPYPHSGSGSP-RMRRQEMQIDKSLNRV 233

Query: 1158 SIFLV 1172
            SIFL+
Sbjct: 234  SIFLL 238


>ref|XP_004172618.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Cucumis sativus]
          Length = 261

 Score =  221 bits (564), Expect = 3e-55
 Identities = 127/265 (47%), Positives = 158/265 (59%), Gaps = 9/265 (3%)
 Frame = +3

Query: 402  QHFSEPSIHFQYEEEEDSVKQKSNPIPAPALASENVNGCFDCNICLDSAHDPVVTLCGHL 581
            Q++S P  + +  E++ S+KQ    I   +  SE+ NGCFDCNICLDSA DPVVTLCGHL
Sbjct: 3    QNYSVPEAYLE-SEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGHL 61

Query: 582  YCWPCIYKWLQVQNSSSVDTGDQPTCPVCKTYISNSSVVPLYGRGTSSAEYESRKRQLDL 761
            YCWPCIYKWL VQ SS+     Q  CPVCK  I+ SS+VPLYGRGTS+++ ES+K  L +
Sbjct: 62   YCWPCIYKWLHVQISSNEPENTQ-NCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 762  AIPHRPPAIGTNAQPSDAASVGSYPHQQLHPNLFNXXXXXXXXXXXXXXXXXXXHQQPYF 941
            A+P RPP    N      +S   YP Q+LH N                      HQQ + 
Sbjct: 121  AVPRRPPP-SMNTPSHSNSSSALYPSQELHSNYIR------------SPSHPIYHQQYFP 167

Query: 942  SHPFGSYASMGQYGFGNTVMTS---PTIGMFGEMVFSGIFGSSGTNLFASSYPTY----- 1097
               +G++AS      GN V+TS   PTIGMFGE VF+ IFGS   NL    Y  Y     
Sbjct: 168  QATYGNFASYSPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL--PYSPYNNSIS 225

Query: 1098 -SSPRRMRRQELQVEKSLRRVSIFL 1169
             ++  RMRRQE+Q++KSL RVSIFL
Sbjct: 226  GNASTRMRRQEMQLDKSLNRVSIFL 250


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