BLASTX nr result

ID: Cephaelis21_contig00017277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017277
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...    69   7e-10
emb|CBI17411.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002333331.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containin...    64   2e-08

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
            vinifera]
          Length = 1643

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -3

Query: 490  SRPPPKGQRVCKFYESGHCKKGASCDYLHP 401
            SR PPKGQRVCKF+ESGHCKKGASCDYLHP
Sbjct: 1614 SRNPPKGQRVCKFFESGHCKKGASCDYLHP 1643


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -3

Query: 490  SRPPPKGQRVCKFYESGHCKKGASCDYLHP 401
            SR PPKGQRVCKF+ESGHCKKGASCDYLHP
Sbjct: 1333 SRNPPKGQRVCKFFESGHCKKGASCDYLHP 1362


>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
            predicted protein [Populus trichocarpa]
          Length = 1256

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 487  RPPPKGQRVCKFYESGHCKKGASCDYLHP 401
            RPPPKGQRVCKFYESG+CKKGASC Y HP
Sbjct: 1228 RPPPKGQRVCKFYESGYCKKGASCSYWHP 1256


>ref|XP_002333331.1| predicted protein [Populus trichocarpa] gi|222836226|gb|EEE74647.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 487 RPPPKGQRVCKFYESGHCKKGASCDYLHP 401
           RPPPKGQRVCKFYESG+CKKGASC Y HP
Sbjct: 82  RPPPKGQRVCKFYESGYCKKGASCSYWHP 110


>ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
            [Glycine max]
          Length = 1365

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 487  RPPPKGQRVCKFYESGHCKKGASCDYLHP 401
            RP PKGQRVCKFYESG+CKKGASCDY HP
Sbjct: 1337 RPLPKGQRVCKFYESGYCKKGASCDYWHP 1365


Top