BLASTX nr result

ID: Cephaelis21_contig00016671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016671
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...    87   2e-15
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,...    85   5e-15

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/67 (58%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   AFRMLKEMVFDFEFGLNFVTFCTILLACTRSGNVTIGRWVHGYALKMVENEMDIRVGTSL 180
           +F +++EM+FD E  LN+VT C+IL AC++SG++ +GRWVH YALK  E E++I VGT++
Sbjct: 234 SFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAM 293

Query: 181 VDMYAKC 201
           VDMYAKC
Sbjct: 294 VDMYAKC 300


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 2/69 (2%)
 Frame = +1

Query: 1   AFRMLKEMVFD--FEFGLNFVTFCTILLACTRSGNVTIGRWVHGYALKMVENEMDIRVGT 174
           AF +LKEMVF   F FGLN +T C++L AC++SG+V++GRWVH YA+K V  ++ + VGT
Sbjct: 229 AFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVGWDLGVMVGT 288

Query: 175 SLVDMYAKC 201
           SLVDMYAKC
Sbjct: 289 SLVDMYAKC 297


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = +1

Query: 1   AFRMLKEMVFDFEFGLNFVTFCTILLACTRSGNVTIGRWVHGYALKMVENEMDIRVGTSL 180
           AF +LKEMVF   F L+FVT C++L AC++SG+V +GRWVH YA+K +  +  + VGTSL
Sbjct: 239 AFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSL 298

Query: 181 VDMYAKC 201
           VDMYAKC
Sbjct: 299 VDMYAKC 305


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/66 (63%), Positives = 49/66 (74%)
 Frame = +1

Query: 4   FRMLKEMVFDFEFGLNFVTFCTILLACTRSGNVTIGRWVHGYALKMVENEMDIRVGTSLV 183
           F +L EMV  F  GLNFVT  +IL AC +SG+V +GRWVH YALK +  EM I VGT+LV
Sbjct: 239 FLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALV 298

Query: 184 DMYAKC 201
           DMYAKC
Sbjct: 299 DMYAKC 304


>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/66 (57%), Positives = 49/66 (74%)
 Frame = +1

Query: 4   FRMLKEMVFDFEFGLNFVTFCTILLACTRSGNVTIGRWVHGYALKMVENEMDIRVGTSLV 183
           F +L EMV      LN+VT C+IL AC +SG+V +GRWVH YALK +  E+D+ VGT+L+
Sbjct: 247 FLLLSEMVLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDMMVGTALI 306

Query: 184 DMYAKC 201
           DMYAKC
Sbjct: 307 DMYAKC 312


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