BLASTX nr result

ID: Cephaelis21_contig00016336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016336
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF02843.1|AC009894_14 Similar to GTP-binding protein [Arabid...    70   9e-15
gb|AFK37697.1| unknown [Lotus japonicus]                               69   4e-14
emb|CBI21786.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...    79   5e-13
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...    78   7e-13

>gb|AAF02843.1|AC009894_14 Similar to GTP-binding protein [Arabidopsis thaliana]
          Length = 419

 Score = 70.5 bits (171), Expect(2) = 9e-15
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   IREVDSILQVVRCFEDNDIVHVNGKVDPNTDVDVIKI 112
           IREVDSILQVVRCFEDNDI+HVNGKVDP +D+DVI +
Sbjct: 146 IREVDSILQVVRCFEDNDIIHVNGKVDPKSDIDVINL 182



 Score = 34.3 bits (77), Expect(2) = 9e-15
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +1

Query: 151 QIEKRMEKLKKGRSKDSQSK 210
           QI KR+E+LKKG++KDSQSK
Sbjct: 191 QIGKRIERLKKGKAKDSQSK 210


>gb|AFK37697.1| unknown [Lotus japonicus]
          Length = 424

 Score = 69.3 bits (168), Expect(2) = 4e-14
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   IREVDSILQVVRCFEDNDIVHVNGKVDPNTDVDVIKI 112
           IREVDSILQVVRCF+DNDI+HVNGKVDP +D+DVI +
Sbjct: 150 IREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINL 186



 Score = 33.1 bits (74), Expect(2) = 4e-14
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +1

Query: 151 QIEKRMEKLKKGRSKDSQ 204
           QIEKR++KLKKG+ KDSQ
Sbjct: 195 QIEKRLDKLKKGKPKDSQ 212


>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/78 (50%), Positives = 52/78 (66%)
 Frame = +2

Query: 2   IREVDSILQVVRCFEDNDIVHVNGKVDPNTDVDVIKINHTAKLRAWSEIHRLRKEWRNSK 181
           IREVDSILQVVRCFEDNDIVHVNGKVDP +D+DVI +        +S++ ++ K     K
Sbjct: 95  IREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLE-----LVFSDLDQIEKRMEKLK 149

Query: 182 RAEVKIHNLKLRDDCTSS 235
           + + K    KL+++   S
Sbjct: 150 KGKAKDSQSKLKEEAEKS 167


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/78 (50%), Positives = 52/78 (66%)
 Frame = +2

Query: 2   IREVDSILQVVRCFEDNDIVHVNGKVDPNTDVDVIKINHTAKLRAWSEIHRLRKEWRNSK 181
           IREVDSILQVVRCFEDNDIVHVNGKVDP +D+DVI +        +S++ ++ K     K
Sbjct: 147 IREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLE-----LVFSDLDQIEKRMEKLK 201

Query: 182 RAEVKIHNLKLRDDCTSS 235
           + + K    KL+++   S
Sbjct: 202 KGKAKDSQSKLKEEAEKS 219


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
           [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
           PREDICTED: GTP-dependent nucleic acid-binding protein
           EngD-like [Cucumis sativus]
          Length = 421

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/78 (48%), Positives = 52/78 (66%)
 Frame = +2

Query: 2   IREVDSILQVVRCFEDNDIVHVNGKVDPNTDVDVIKINHTAKLRAWSEIHRLRKEWRNSK 181
           IREVDSILQVVRCFEDNDIVHVNGK+DP TD+DVI +        +S++ ++ K     K
Sbjct: 146 IREVDSILQVVRCFEDNDIVHVNGKIDPKTDIDVINLE-----LVFSDLDQIEKRLEKLK 200

Query: 182 RAEVKIHNLKLRDDCTSS 235
           + + K    K++++   S
Sbjct: 201 KGKAKDSQSKVKEEAEKS 218


Top