BLASTX nr result

ID: Cephaelis21_contig00016292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016292
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21897.3| unnamed protein product [Vitis vinifera]               97   6e-18
ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...    97   6e-18
gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]         94   3e-17
gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tubero...    94   3e-17
gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tubero...    94   4e-17

>emb|CBI21897.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 58/132 (43%), Positives = 65/132 (49%)
 Frame = -3

Query: 812 RGGYGKLVQIELEAQRQLVDYNAGSLGTFPPVMPPQYXXXXXXXXXXXXXXXGRXXXXXX 633
           RGGYGKLVQ ELEAQRQLVDY +GSLG+FPPVMP QY                R      
Sbjct: 19  RGGYGKLVQRELEAQRQLVDYGSGSLGSFPPVMPSQYGRHGGSQGHGGSNRHSR------ 72

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXDFNXXXXXXXXXXRPEFSKRNFGNESRRSSDHDS 453
                                     D+             +FSKR   ++SRR+SDHDS
Sbjct: 73  --------------------------DYPRKRHRDDDRHSHDFSKRTSDHDSRRNSDHDS 106

Query: 452 RPEKNPRFRESG 417
           RPEKNPRFRESG
Sbjct: 107 RPEKNPRFRESG 118


>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 58/132 (43%), Positives = 65/132 (49%)
 Frame = -3

Query: 812 RGGYGKLVQIELEAQRQLVDYNAGSLGTFPPVMPPQYXXXXXXXXXXXXXXXGRXXXXXX 633
           RGGYGKLVQ ELEAQRQLVDY +GSLG+FPPVMP QY                R      
Sbjct: 140 RGGYGKLVQRELEAQRQLVDYGSGSLGSFPPVMPSQYGRHGGSQGHGGSNRHSR------ 193

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXDFNXXXXXXXXXXRPEFSKRNFGNESRRSSDHDS 453
                                     D+             +FSKR   ++SRR+SDHDS
Sbjct: 194 --------------------------DYPRKRHRDDDRHSHDFSKRTSDHDSRRNSDHDS 227

Query: 452 RPEKNPRFRESG 417
           RPEKNPRFRESG
Sbjct: 228 RPEKNPRFRESG 239


>gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 55/132 (41%), Positives = 64/132 (48%)
 Frame = -3

Query: 812 RGGYGKLVQIELEAQRQLVDYNAGSLGTFPPVMPPQYXXXXXXXXXXXXXXXGRXXXXXX 633
           RGGYGKLVQ ELEAQRQLVDY  GSLG +PPVMPP +                       
Sbjct: 140 RGGYGKLVQRELEAQRQLVDYGTGSLGAYPPVMPPPHYGRHNGGNHGRGGSYRH------ 193

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXDFNXXXXXXXXXXRPEFSKRNFGNESRRSSDHDS 453
                                     D++          RP++ KR +  ESRR+SDH+S
Sbjct: 194 ------------------------GRDYHRKRHREDDHPRPDYPKRTYDRESRRNSDHES 229

Query: 452 RPEKNPRFRESG 417
           RPEKNPRFRESG
Sbjct: 230 RPEKNPRFRESG 241


>gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
           gi|219944403|gb|ACL54983.1| nuclear cap-binding protein
           CBP20 [Solanum tuberosum] gi|224460057|gb|ACN43579.1|
           nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 55/132 (41%), Positives = 64/132 (48%)
 Frame = -3

Query: 812 RGGYGKLVQIELEAQRQLVDYNAGSLGTFPPVMPPQYXXXXXXXXXXXXXXXGRXXXXXX 633
           RGGYGKLVQ ELEAQRQLVDY  GSLG +PPVMPP +                       
Sbjct: 140 RGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPPPHYGRHNGGNHGRGGSYRH------ 193

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXDFNXXXXXXXXXXRPEFSKRNFGNESRRSSDHDS 453
                                     D++          RP++ KR +  ESRR+SDH+S
Sbjct: 194 ------------------------GRDYHRKRHREDDHPRPDYPKRTYDRESRRNSDHES 229

Query: 452 RPEKNPRFRESG 417
           RPEKNPRFRESG
Sbjct: 230 RPEKNPRFRESG 241


>gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
           gi|219944399|gb|ACL54981.1| nuclear cap-binding protein
           CBP20 [Solanum tuberosum] gi|224460063|gb|ACN43582.1|
           nuclear cap-binding protein [Solanum tuberosum]
           gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum
           tuberosum]
          Length = 255

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 55/132 (41%), Positives = 63/132 (47%)
 Frame = -3

Query: 812 RGGYGKLVQIELEAQRQLVDYNAGSLGTFPPVMPPQYXXXXXXXXXXXXXXXGRXXXXXX 633
           RGGYGKLVQ ELEAQRQLVDY  GSLG +PPVMPP +                       
Sbjct: 140 RGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPPPHYGRHNGGNHGRGGSYRH------ 193

Query: 632 XXXXXXXXXXXXXXXXXXXXXXXXXXDFNXXXXXXXXXXRPEFSKRNFGNESRRSSDHDS 453
                                     D+           RP++ KR +  ESRR+SDH+S
Sbjct: 194 ------------------------GRDYQRKRHREDDHHRPDYPKRTYDRESRRNSDHES 229

Query: 452 RPEKNPRFRESG 417
           RPEKNPRFRESG
Sbjct: 230 RPEKNPRFRESG 241