BLASTX nr result

ID: Cephaelis21_contig00016234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016234
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   159   2e-37
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   159   2e-37
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   155   4e-36
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   154   5e-36
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35

>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/107 (74%), Positives = 97/107 (90%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   LRDIMVVKVSDASGEAWLSVFNEEAEKILGYSADELNKLKTE-EEESSYQMKLKEATWVP 178
           LR IMVV+VSDASGEAW+S FNEEAE+I+G SADEL++LK++  EE+SYQ+KLKEATWVP
Sbjct: 454 LRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVP 513

Query: 179 HLFGVSVTPHEYNNEKRQRITVRVVAPVDYAVESRYLVEEVSKMKIS 319
           HLF VSV+ +EYNNEKRQRITVR VAPVD+A ESR+L+EE++KMK S
Sbjct: 514 HLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMKAS 560


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/107 (74%), Positives = 97/107 (90%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   LRDIMVVKVSDASGEAWLSVFNEEAEKILGYSADELNKLKTE-EEESSYQMKLKEATWVP 178
           LR IMVV+VSDASGEAW+S FNEEAE+I+G SADEL++LK++  EE+SYQ+KLKEATWVP
Sbjct: 497 LRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVP 556

Query: 179 HLFGVSVTPHEYNNEKRQRITVRVVAPVDYAVESRYLVEEVSKMKIS 319
           HLF VSV+ +EYNNEKRQRITVR VAPVD+A ESR+L+EE++KMK S
Sbjct: 557 HLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMKAS 603


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/104 (71%), Positives = 91/104 (87%)
 Frame = +2

Query: 2   LRDIMVVKVSDASGEAWLSVFNEEAEKILGYSADELNKLKTEEEESSYQMKLKEATWVPH 181
           LR IMVVKVSDASGE W+S FN E E+I+G SADEL+KLK++E+ +SY++KLKEATW PH
Sbjct: 516 LRYIMVVKVSDASGEGWVSAFNNEGERIIGCSADELDKLKSQEDGNSYELKLKEATWSPH 575

Query: 182 LFGVSVTPHEYNNEKRQRITVRVVAPVDYAVESRYLVEEVSKMK 313
           LF VSV  +EYNNEKRQRITVR VAP+D+A ESR+L+EE+SK+K
Sbjct: 576 LFRVSVAQNEYNNEKRQRITVRAVAPLDFAAESRFLLEEISKIK 619


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/106 (71%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   LRDIMVVKVSDASGEAWLSVFNEEAEKILGYSADELNKLKTEEEESS-YQMKLKEATWVP 178
           LR I+ ++VSD SGEAWLSVFNE+AEKI+G SADEL++L++++ +SS YQMKLKEATWVP
Sbjct: 497 LRYIVAMRVSDTSGEAWLSVFNEQAEKIIGCSADELDRLRSQDGDSSAYQMKLKEATWVP 556

Query: 179 HLFGVSVTPHEYNNEKRQRITVRVVAPVDYAVESRYLVEEVSKMKI 316
           +LF VSVTP EYNNEKRQRITVR  APVD+A ESRY +EE++KM I
Sbjct: 557 YLFRVSVTPQEYNNEKRQRITVRAAAPVDFAAESRYFLEEMAKMNI 602


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/104 (71%), Positives = 90/104 (86%)
 Frame = +2

Query: 2   LRDIMVVKVSDASGEAWLSVFNEEAEKILGYSADELNKLKTEEEESSYQMKLKEATWVPH 181
           LR IMVVKVSD SGE W+S FNEEAEKI+G SADEL+ LK++ EE++YQ +LKEATW PH
Sbjct: 497 LRYIMVVKVSDGSGEGWVSAFNEEAEKIIGCSADELDLLKSQIEENTYQQRLKEATWNPH 556

Query: 182 LFGVSVTPHEYNNEKRQRITVRVVAPVDYAVESRYLVEEVSKMK 313
           L  +SV+ +EYNNEKRQR+TVR VAPVD+A ESR+L+EE+SKMK
Sbjct: 557 LLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESRFLLEEISKMK 600


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