BLASTX nr result

ID: Cephaelis21_contig00016200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016200
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   255   4e-66
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   253   2e-65
ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   252   4e-65
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
gb|ABK93026.1| unknown [Populus trichocarpa]                          249   3e-64

>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  255 bits (652), Expect = 4e-66
 Identities = 123/138 (89%), Positives = 133/138 (96%)
 Frame = +3

Query: 3   KYSKLCRIVQKLVNILKQMAPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 182
           KYS +CR+VQKLVNILKQM PRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSGICRMVQKLVNILKQMDPRDPYRVEMTDILLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 183 CRRRLSTVLVRLKFTEHLKEAVTYIEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 362
           CRRRLSTVL+RLKF EHLKEA+TYIEQGHIRVGP+TVTD AFLVTRNMEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAITYIEQGHIRVGPETVTDPAFLVTRNMEDFVTWVDTSKI 164

Query: 363 RRKVLEYNDKLDDYDAMN 416
           +RKVLEYN+KLDDYDAMN
Sbjct: 165 KRKVLEYNEKLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  253 bits (645), Expect = 2e-65
 Identities = 122/138 (88%), Positives = 131/138 (94%)
 Frame = +3

Query: 3   KYSKLCRIVQKLVNILKQMAPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 182
           KYS +CR+VQKL NILKQM PRDPFR+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPFRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 183 CRRRLSTVLVRLKFTEHLKEAVTYIEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 362
           CRRRLSTVL+RLKF EHLKEAVTYIEQGHIRVGP+TVTD AFLVTRN EDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAVTYIEQGHIRVGPETVTDPAFLVTRNTEDFVTWVDTSKI 164

Query: 363 RRKVLEYNDKLDDYDAMN 416
           +RKVLEYN+K+DDYDAMN
Sbjct: 165 KRKVLEYNEKVDDYDAMN 182


>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  252 bits (643), Expect = 4e-65
 Identities = 122/138 (88%), Positives = 133/138 (96%)
 Frame = +3

Query: 3   KYSKLCRIVQKLVNILKQMAPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 182
           KYS LCR+VQKLVNILKQM PRDPFRIEMTD LLEKLYN+GVIP+RKSLALCDRL+VSSF
Sbjct: 45  KYSGLCRMVQKLVNILKQMDPRDPFRIEMTDMLLEKLYNIGVIPTRKSLALCDRLAVSSF 104

Query: 183 CRRRLSTVLVRLKFTEHLKEAVTYIEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 362
           CRRRLSTVLVRLKF EHLKEAVTYIEQGHIRVGPDTVTD AFLVTRN+EDF+TWVD+SKI
Sbjct: 105 CRRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPDTVTDPAFLVTRNLEDFVTWVDSSKI 164

Query: 363 RRKVLEYNDKLDDYDAMN 416
           +RKVL+YN++LDDYDAMN
Sbjct: 165 KRKVLQYNERLDDYDAMN 182


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  249 bits (637), Expect = 2e-64
 Identities = 119/138 (86%), Positives = 131/138 (94%)
 Frame = +3

Query: 3   KYSKLCRIVQKLVNILKQMAPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 182
           KYS +CR+VQKL NILKQM PRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPYRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 183 CRRRLSTVLVRLKFTEHLKEAVTYIEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 362
           CRRRLSTVL+RLKF+EHLKEA+TYIEQGHIR GP+TVTD AFLVTR+MEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFSEHLKEAITYIEQGHIRAGPETVTDPAFLVTRSMEDFVTWVDTSKI 164

Query: 363 RRKVLEYNDKLDDYDAMN 416
           +RKVLEYN+ LDDYDAMN
Sbjct: 165 KRKVLEYNENLDDYDAMN 182


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  249 bits (636), Expect = 3e-64
 Identities = 119/138 (86%), Positives = 130/138 (94%)
 Frame = +3

Query: 3   KYSKLCRIVQKLVNILKQMAPRDPFRIEMTDALLEKLYNMGVIPSRKSLALCDRLSVSSF 182
           KYS +CR+VQKL NILKQM PRDP+R+EMTD LLEKLYNMGVIPSRKSLALCDRLSVSSF
Sbjct: 45  KYSSVCRMVQKLTNILKQMDPRDPYRVEMTDVLLEKLYNMGVIPSRKSLALCDRLSVSSF 104

Query: 183 CRRRLSTVLVRLKFTEHLKEAVTYIEQGHIRVGPDTVTDDAFLVTRNMEDFITWVDTSKI 362
           CRRRLSTVL+RLKF EHLKEA+TYIEQGHIR GP+TVTD AFLVTR+MEDF+TWVDTSKI
Sbjct: 105 CRRRLSTVLMRLKFAEHLKEAITYIEQGHIRAGPETVTDPAFLVTRSMEDFVTWVDTSKI 164

Query: 363 RRKVLEYNDKLDDYDAMN 416
           +RKVLEYN+ LDDYDAMN
Sbjct: 165 KRKVLEYNENLDDYDAMN 182


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