BLASTX nr result

ID: Cephaelis21_contig00015975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015975
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   184   1e-44
ref|XP_002886449.1| translation release factor [Arabidopsis lyra...   181   1e-43
ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|2...   179   5e-43
ref|NP_001077760.1| Class I peptide chain release factor [Arabid...   177   2e-42
ref|XP_002509613.1| immature colon carcinoma transcript, putativ...   176   3e-42

>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
           vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score =  184 bits (466), Expect = 1e-44
 Identities = 92/126 (73%), Positives = 108/126 (85%)
 Frame = -2

Query: 378 SRGISSTPVRCAAAANGTQSGGKKAPARLAQVQEFLLVANERGNAAGDEPIPKVTLDHVT 199
           +RGIS + +RCAAA +G   GG+K  ARL+QVQ+ L  A ER  + G+EP PK+TLDHVT
Sbjct: 43  NRGISYSRIRCAAADSG--DGGRKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVT 100

Query: 198 VNFARSGGPGGQNVNKVNTKVDMRFNVKNADWLSERVKERILQMEKNRMNKDGELVICST 19
           V+FARSGGPGGQNVNKVNTKVDMRFNVKNA WLS+RV+ERI+QMEKNR+NKDGE+VI ST
Sbjct: 101 VSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISST 160

Query: 18  KTRTQK 1
           KTRTQK
Sbjct: 161 KTRTQK 166


>ref|XP_002886449.1| translation release factor [Arabidopsis lyrata subsp. lyrata]
           gi|297332290|gb|EFH62708.1| translation release factor
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  181 bits (458), Expect = 1e-43
 Identities = 98/179 (54%), Positives = 122/179 (68%), Gaps = 5/179 (2%)
 Frame = -2

Query: 522 MAVVRTTAREIFR-----PSPLFPETVRCLFRLPLPTAVTPSSPPSRFNLQFFSRGISST 358
           MA +RT    I R     P  L   +  C   LP    +TP   P   N +F S      
Sbjct: 1   MAAIRTMTNMILREFSHHPLLLHSSSKSCQSLLPC-LRLTPLIAPIHSNSRFGS------ 53

Query: 357 PVRCAAAANGTQSGGKKAPARLAQVQEFLLVANERGNAAGDEPIPKVTLDHVTVNFARSG 178
            +RC A+ +G  +G +K  +RL+QVQ+ L  A ER N+AG+EP P++TLDHVT+NFARSG
Sbjct: 54  -IRCVASTSGGSNGDRKVSSRLSQVQQMLHEAEERANSAGNEPTPQITLDHVTLNFARSG 112

Query: 177 GPGGQNVNKVNTKVDMRFNVKNADWLSERVKERILQMEKNRMNKDGELVICSTKTRTQK 1
           GPGGQNVNK+NTKVDMRFNVKNA WLS+R++E+I+  EKNR+NKDGELVI STKTRTQK
Sbjct: 113 GPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKIILKEKNRINKDGELVISSTKTRTQK 171


>ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|222841868|gb|EEE79415.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  179 bits (453), Expect = 5e-43
 Identities = 102/180 (56%), Positives = 131/180 (72%), Gaps = 6/180 (3%)
 Frame = -2

Query: 522 MAVVRTTA----REIFRPSPLFPETVRCLFRLPLPT-AVTPSSPPSRF-NLQFFSRGISS 361
           MAV+RT+     +++F  + L P         P+P+ +V+ +    R+ NL+  +R IS 
Sbjct: 1   MAVIRTSTNMILKQVFLDNLLIP---------PVPSFSVSRTLGNLRWANLKVPNREISF 51

Query: 360 TPVRCAAAANGTQSGGKKAPARLAQVQEFLLVANERGNAAGDEPIPKVTLDHVTVNFARS 181
           + ++CA       S  KK  +RL+QVQ+ L  A ER +AAG+EP PK+TLDHVTV+FARS
Sbjct: 52  SRIKCAG------SDDKKVSSRLSQVQQLLQEAEERASAAGNEPPPKITLDHVTVSFARS 105

Query: 180 GGPGGQNVNKVNTKVDMRFNVKNADWLSERVKERILQMEKNRMNKDGELVICSTKTRTQK 1
           GGPGGQNVNKVNTKVDMRFNVKNA WLSER++ERI+QMEKNR+NKDGE+VI STKTRTQK
Sbjct: 106 GGPGGQNVNKVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINKDGEIVISSTKTRTQK 165


>ref|NP_001077760.1| Class I peptide chain release factor [Arabidopsis thaliana]
           gi|145326104|ref|NP_001077761.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
           gi|27754314|gb|AAO22610.1| unknown protein [Arabidopsis
           thaliana] gi|28393873|gb|AAO42344.1| unknown protein
           [Arabidopsis thaliana] gi|332195891|gb|AEE34012.1| Class
           I peptide chain release factor [Arabidopsis thaliana]
           gi|332195892|gb|AEE34013.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
          Length = 236

 Score =  177 bits (448), Expect = 2e-42
 Identities = 98/179 (54%), Positives = 121/179 (67%), Gaps = 5/179 (2%)
 Frame = -2

Query: 522 MAVVRTTAREIFR-----PSPLFPETVRCLFRLPLPTAVTPSSPPSRFNLQFFSRGISST 358
           MA +RT    I R     P  L   +  C   LP    +TP   P   N +  S      
Sbjct: 1   MAAIRTMTNMILREFIHHPLLLHSSSKSCQSLLPC-LRLTPLISPIHSNSRLVS------ 53

Query: 357 PVRCAAAANGTQSGGKKAPARLAQVQEFLLVANERGNAAGDEPIPKVTLDHVTVNFARSG 178
            VRCAA+ +G   G +K  +RL+QVQ+ L  A ER ++AG+EP P++TLD+VT+NFARSG
Sbjct: 54  -VRCAASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGNEPTPQITLDNVTLNFARSG 112

Query: 177 GPGGQNVNKVNTKVDMRFNVKNADWLSERVKERILQMEKNRMNKDGELVICSTKTRTQK 1
           GPGGQNVNK+NTKVDMRFNVKNA WLS+R++E+IL  EKNR+NKDGELVI STKTRTQK
Sbjct: 113 GPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISSTKTRTQK 171


>ref|XP_002509613.1| immature colon carcinoma transcript, putative [Ricinus communis]
           gi|223549512|gb|EEF51000.1| immature colon carcinoma
           transcript, putative [Ricinus communis]
          Length = 234

 Score =  176 bits (446), Expect = 3e-42
 Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 8/182 (4%)
 Frame = -2

Query: 522 MAVVRTTAREIFRPSPLFPETVRCLFRLPLPTAVTPSSPPSRFN--------LQFFSRGI 367
           MA  RT    I +      E V C  RL   +  + S P  R          ++F  R +
Sbjct: 1   MAATRTATTMILK------EIVYCRLRLSFSSLSSSSLPSLRLTPTNLHANAVKFTRREL 54

Query: 366 SSTPVRCAAAANGTQSGGKKAPARLAQVQEFLLVANERGNAAGDEPIPKVTLDHVTVNFA 187
           S + +RCAA      S  KK  ARL+QVQ+ L  A E+  +AG+EP PK+TLDHVTV+FA
Sbjct: 55  SFSRIRCAA------SDDKKVSARLSQVQQLLQEAEEQAISAGNEPPPKITLDHVTVSFA 108

Query: 186 RSGGPGGQNVNKVNTKVDMRFNVKNADWLSERVKERILQMEKNRMNKDGELVICSTKTRT 7
           RSGGPGGQNVNKVNTKVDMRFNVK+A WLS+R+++RI+QMEKNR+NKDGE+VI STKTRT
Sbjct: 109 RSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIVISSTKTRT 168

Query: 6   QK 1
           QK
Sbjct: 169 QK 170


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