BLASTX nr result

ID: Cephaelis21_contig00015623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015623
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234244.1| CONSTANS interacting protein 2a [Solanum lyc...   247   3e-63
ref|XP_002284041.1| PREDICTED: nuclear transcription factor Y su...   245   1e-62
ref|XP_003634220.1| PREDICTED: nuclear transcription factor Y su...   245   1e-62
gb|ABK95059.1| unknown [Populus trichocarpa]                          238   2e-60
ref|NP_201152.1| nuclear transcription factor Y subunit C-4 [Ara...   236   7e-60

>ref|NP_001234244.1| CONSTANS interacting protein 2a [Solanum lycopersicum]
           gi|45544867|gb|AAS67369.1| CONSTANS interacting protein
           2a [Solanum lycopersicum]
          Length = 232

 Score =  247 bits (631), Expect = 3e-63
 Identities = 129/173 (74%), Positives = 132/173 (76%)
 Frame = -2

Query: 912 YPGQAPYHHXXXXXXXXXQMFWNYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 733
           YP Q PYHH         QMFW YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA
Sbjct: 28  YPSQTPYHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 87

Query: 732 EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 553
           EAP+LFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI
Sbjct: 88  EAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 147

Query: 552 KEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYYYPPMGQPAPPGVMIGRPAV 394
           K+E                            PYYYPPMGQPAP GVM+GRPAV
Sbjct: 148 KDE------------GVGLGPGIVGSTASGVPYYYPPMGQPAPGGVMLGRPAV 188


>ref|XP_002284041.1| PREDICTED: nuclear transcription factor Y subunit C-1-like isoform
           1 [Vitis vinifera] gi|359491105|ref|XP_003634221.1|
           PREDICTED: nuclear transcription factor Y subunit
           C-1-like isoform 3 [Vitis vinifera]
          Length = 211

 Score =  245 bits (626), Expect = 1e-62
 Identities = 131/175 (74%), Positives = 135/175 (77%)
 Frame = -2

Query: 918 SPYPGQAPYHHXXXXXXXXXQMFWNYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI 739
           SPYP Q P+HH         QMFW+YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI
Sbjct: 10  SPYPPQQPFHHLLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI 69

Query: 738 SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 559
           SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD
Sbjct: 70  SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 129

Query: 558 EIKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYYYPPMGQPAPPGVMIGRPAV 394
           EIK+E                            PYYYPPMGQPA PGVM+GRPAV
Sbjct: 130 EIKDE---------------GGLGMVGSTASGVPYYYPPMGQPA-PGVMMGRPAV 168


>ref|XP_003634220.1| PREDICTED: nuclear transcription factor Y subunit C-1-like isoform
           2 [Vitis vinifera] gi|147819278|emb|CAN73357.1|
           hypothetical protein VITISV_012625 [Vitis vinifera]
          Length = 213

 Score =  245 bits (626), Expect = 1e-62
 Identities = 131/175 (74%), Positives = 135/175 (77%)
 Frame = -2

Query: 918 SPYPGQAPYHHXXXXXXXXXQMFWNYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI 739
           SPYP Q P+HH         QMFW+YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI
Sbjct: 10  SPYPPQQPFHHLLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMI 69

Query: 738 SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 559
           SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD
Sbjct: 70  SAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD 129

Query: 558 EIKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYYYPPMGQPAPPGVMIGRPAV 394
           EIK+E                            PYYYPPMGQPA PGVM+GRPAV
Sbjct: 130 EIKDE---------------GGLGMVGSTASGVPYYYPPMGQPA-PGVMMGRPAV 168


>gb|ABK95059.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  238 bits (607), Expect = 2e-60
 Identities = 129/177 (72%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
 Frame = -2

Query: 909 PGQAPYHHXXXXXXXXXQMFWNYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAE 730
           P  AP+HH         QMFW+YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAE
Sbjct: 34  PSSAPFHHLLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAE 93

Query: 729 APILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 550
           APILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK
Sbjct: 94  APILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 153

Query: 549 EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYYYPPMGQPAPP----GVMIGRPAVD 391
           EE                            PYYYPPMGQPA      G+MIGRPAVD
Sbjct: 154 EE-------------AAGLGGIVGATASGVPYYYPPMGQPAAAAAAGGMMIGRPAVD 197


>ref|NP_201152.1| nuclear transcription factor Y subunit C-4 [Arabidopsis thaliana]
           gi|79332019|ref|NP_001032130.1| nuclear transcription
           factor Y subunit C-4 [Arabidopsis thaliana]
           gi|75262732|sp|Q9FMV5.1|NFYC4_ARATH RecName:
           Full=Nuclear transcription factor Y subunit C-4;
           Short=AtNF-YC-4 gi|9758288|dbj|BAB08812.1| transcription
           factor Hap5a-like protein [Arabidopsis thaliana]
           gi|18252935|gb|AAL62394.1| transcription factor
           Hap5a-like protein [Arabidopsis thaliana]
           gi|23198020|gb|AAN15537.1| transcription factor
           Hap5a-like protein [Arabidopsis thaliana]
           gi|222423523|dbj|BAH19731.1| AT5G63470 [Arabidopsis
           thaliana] gi|332010372|gb|AED97755.1| nuclear
           transcription factor Y subunit C-4 [Arabidopsis
           thaliana] gi|332010373|gb|AED97756.1| nuclear
           transcription factor Y subunit C-4 [Arabidopsis
           thaliana]
          Length = 250

 Score =  236 bits (602), Expect = 7e-60
 Identities = 128/173 (73%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
 Frame = -2

Query: 906 GQAPYHHXXXXXXXXXQMFWNYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEA 727
           G A YHH         QMFW YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEA
Sbjct: 42  GGATYHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEA 101

Query: 726 PILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKE 547
           PILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIKE
Sbjct: 102 PILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKE 161

Query: 546 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYYYPPMGQPA-PPGVMIGRPAVD 391
           E                            PYYYPPMGQPA P G+MIGRPA+D
Sbjct: 162 E--------EDAASALGGGGMVAPAASGVPYYYPPMGQPAVPGGMMIGRPAMD 206


Top