BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015581
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, ch...   283   3e-88
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop...   271   2e-81
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]   268   1e-80
ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arab...   267   7e-80
ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]...   265   2e-79

>sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
           Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
           gi|3298439|dbj|BAA31510.1| chloroplast ribosomal protein
           L4 [Nicotiana tabacum]
          Length = 282

 Score =  283 bits (723), Expect(2) = 3e-88
 Identities = 140/170 (82%), Positives = 155/170 (91%)
 Frame = -2

Query: 953 DLRNRRRGTASTLTRAEVRGGGSKPYSQKKMGKARRGSQRSPLLRGGGVIFGPKPKDWSV 774
           DLRN+RRGTASTLTR+EVRGGG KPY QKK G+ARRGS R+PL  GGGV+FGPKPKDWSV
Sbjct: 84  DLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSNRTPLRPGGGVVFGPKPKDWSV 143

Query: 773 KINKKEKRLAISTAINSAVGNAIVVEDFGDKFEKPKTKEFIAMMRRLGLDPKEKAMFLMT 594
           KINKKEKRLAISTA++SA  N IVVE+F DKFEKPKTKEFI +MRR GLDPKEK++FLMT
Sbjct: 144 KINKKEKRLAISTALSSASENTIVVEEFNDKFEKPKTKEFIDLMRRWGLDPKEKSLFLMT 203

Query: 593 EVSENVVLSSRNIGTLKMLTPRTLNLFDILDSEMLVFTKGAVEFLNERYG 444
           +VS+NV+LSSRNIGTLKMLTPRTLNLFDILDSE LV TK AV+FLNERYG
Sbjct: 204 DVSDNVILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTKSAVDFLNERYG 253



 Score = 70.5 bits (171), Expect(2) = 3e-88
 Identities = 39/68 (57%), Positives = 50/68 (73%)
 Frame = -3

Query: 1231 QPPSQLFFNFPRRQVCSLNAAAPKTGVRSELATLPVLSFEGDQVGSATLDLKSATLDTAR 1052
            Q    L F  P++    L+ AA  T +RSE+AT+P+LSF+G +VGS TL+LKSA LDTAR
Sbjct: 20   QSSKHLLFRSPKQ----LSVAAIAT-IRSEVATIPILSFDGAEVGSTTLNLKSAPLDTAR 74

Query: 1051 AVVHRGIT 1028
            AVVHRG+T
Sbjct: 75   AVVHRGLT 82


>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
           sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
           ribosomal protein L4, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  271 bits (692), Expect(2) = 2e-81
 Identities = 131/172 (76%), Positives = 153/172 (88%)
 Frame = -2

Query: 953 DLRNRRRGTASTLTRAEVRGGGSKPYSQKKMGKARRGSQRSPLLRGGGVIFGPKPKDWSV 774
           D +N+RRGTASTLTRAEV GGG KPY QKK G+ARRGS R+PL  GGGV+FGPKP+DWS+
Sbjct: 90  DQQNKRRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSI 149

Query: 773 KINKKEKRLAISTAINSAVGNAIVVEDFGDKFEKPKTKEFIAMMRRLGLDPKEKAMFLMT 594
           KIN+KEK+LAISTA+ SA  N IVVE+FGDKFEKPKTKEFIA ++R G+DPKEK++FLMT
Sbjct: 150 KINRKEKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMT 209

Query: 593 EVSENVVLSSRNIGTLKMLTPRTLNLFDILDSEMLVFTKGAVEFLNERYGLN 438
           EVS+NV LSSRNIGTLK+LTPRTLNLFDILDS+ LV T  AV++LNERYG+N
Sbjct: 210 EVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLNERYGIN 261



 Score = 60.1 bits (144), Expect(2) = 2e-81
 Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
 Frame = -3

Query: 1222 SQLFFNFPRRQVCSL------NAAAPKT---GVRSELATLPVLSFEGDQVGSATLDLKSA 1070
            S +F + P  Q  +L      N+  P+T    + SELATLPVLSF G +VG   LDLKSA
Sbjct: 15   SSVFLSSPSHQNLNLFFNSKPNSLKPQTKTLSISSELATLPVLSFTGQKVGETYLDLKSA 74

Query: 1069 TLDTARAVVHRGI 1031
              +TARAVVHR I
Sbjct: 75   PPETARAVVHRAI 87


>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
          Length = 306

 Score =  268 bits (686), Expect(2) = 1e-80
 Identities = 131/174 (75%), Positives = 153/174 (87%)
 Frame = -2

Query: 953 DLRNRRRGTASTLTRAEVRGGGSKPYSQKKMGKARRGSQRSPLLRGGGVIFGPKPKDWSV 774
           DL+NRRRGTASTLTR EVRGGG KPY QKK G+ARRGSQR+PL  GGGV+FGPKP+DWS+
Sbjct: 89  DLQNRRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSI 148

Query: 773 KINKKEKRLAISTAINSAVGNAIVVEDFGDKFEKPKTKEFIAMMRRLGLDPKEKAMFLMT 594
           KIN+KEKRLAISTA++SA  N IVVEDF DKF+KPKTKEFI+ M+R G+DPKEK+MFLMT
Sbjct: 149 KINRKEKRLAISTAMSSAAVNTIVVEDFSDKFDKPKTKEFISAMKRWGIDPKEKSMFLMT 208

Query: 593 EVSENVVLSSRNIGTLKMLTPRTLNLFDILDSEMLVFTKGAVEFLNERYGLNSI 432
           EVS+NV LSSRNIGTLKMLTPRTLNLFDIL+S+ LV T+  V++LN  Y + +I
Sbjct: 209 EVSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDYLNRMYAVEAI 262



 Score = 59.3 bits (142), Expect(2) = 1e-80
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 1153 VRSELATLPVLSFEGDQVGSATLDLKSATLDTARAVVHRGI 1031
            VRS+L  +P+LSF G++VG   L+LKSA LDTARAVVHRGI
Sbjct: 46   VRSDLVAIPILSFTGEKVGETQLNLKSAPLDTARAVVHRGI 86


>ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arabidopsis lyrata subsp.
           lyrata] gi|297335482|gb|EFH65899.1| hypothetical protein
           ARALYDRAFT_470751 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  267 bits (683), Expect(2) = 7e-80
 Identities = 132/177 (74%), Positives = 156/177 (88%), Gaps = 3/177 (1%)
 Frame = -2

Query: 953 DLRNRRRGTASTLTRAEVRGGGSKPYSQKKMGKARRGSQRSPLLRGGGVIFGPKPKDWSV 774
           DL+N+RRGTASTLTR EVRGGG KPY+QKK G ARRGSQR+PL  GGGV+FGP+PKDWS+
Sbjct: 90  DLQNKRRGTASTLTRGEVRGGGIKPYAQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSI 149

Query: 773 KINKKEKRLAISTAINSAV---GNAIVVEDFGDKFEKPKTKEFIAMMRRLGLDPKEKAMF 603
           KIN+KEK+LAISTA++SAV   G AIVVE+FG+KFEKPKTK+F+A M+R GLDPKEKAMF
Sbjct: 150 KINRKEKKLAISTALSSAVSAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMF 209

Query: 602 LMTEVSENVVLSSRNIGTLKMLTPRTLNLFDILDSEMLVFTKGAVEFLNERYGLNSI 432
           LM +V ENV  SSRNIGTL+MLTPRTLNLFDIL+S+ LV T  AVEFLN RYG++++
Sbjct: 210 LMIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPAAVEFLNARYGVDAV 266



 Score = 58.2 bits (139), Expect(2) = 7e-80
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 1153 VRSELATLPVLSFEGDQVGSATLDLKSATLDTARAVVHRGI 1031
            V S+LATLP++SFEG++VG   LDLK+A  DTARAVVHR I
Sbjct: 47   VASQLATLPIISFEGEKVGETYLDLKTAPEDTARAVVHRAI 87


>ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
           gi|21542429|sp|O50061.2|RK4_ARATH RecName: Full=50S
           ribosomal protein L4, chloroplastic; AltName: Full=CL4;
           AltName: Full=R-protein L4; Flags: Precursor
           gi|17380866|gb|AAL36245.1| unknown protein [Arabidopsis
           thaliana] gi|21436209|gb|AAM51392.1| unknown protein
           [Arabidopsis thaliana] gi|110741117|dbj|BAE98652.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332189985|gb|AEE28106.1| 50S ribosomal protein L4
           [Arabidopsis thaliana]
          Length = 282

 Score =  265 bits (678), Expect(2) = 2e-79
 Identities = 131/177 (74%), Positives = 154/177 (87%), Gaps = 3/177 (1%)
 Frame = -2

Query: 953 DLRNRRRGTASTLTRAEVRGGGSKPYSQKKMGKARRGSQRSPLLRGGGVIFGPKPKDWSV 774
           DL N+RRGTASTLTR EVRGGG KPYSQKK G ARRGSQR+PL  GGGV+FGP+PKDWS+
Sbjct: 90  DLNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSI 149

Query: 773 KINKKEKRLAISTAINSAV---GNAIVVEDFGDKFEKPKTKEFIAMMRRLGLDPKEKAMF 603
           KIN+KEK+LAISTA++SA    G AIVVE+FG+KFEKPKTK+F+A M+R GLDPKEKAMF
Sbjct: 150 KINRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMF 209

Query: 602 LMTEVSENVVLSSRNIGTLKMLTPRTLNLFDILDSEMLVFTKGAVEFLNERYGLNSI 432
           LM +V ENV  SSRNIGTL+MLTPRTLNLFDIL+++ LV T  AVEFLN RYG++++
Sbjct: 210 LMIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYGVDAV 266



 Score = 58.9 bits (141), Expect(2) = 2e-79
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = -3

Query: 1153 VRSELATLPVLSFEGDQVGSATLDLKSATLDTARAVVHRGI 1031
            V S+LATLP+LSFEG++VG   LDLK+A  DTARAVVHR I
Sbjct: 47   VSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAI 87