BLASTX nr result

ID: Cephaelis21_contig00015513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015513
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...   135   5e-33
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]   126   7e-32
ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...   125   1e-31
ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...   126   8e-31
ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-29

>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score =  135 bits (339), Expect(2) = 5e-33
 Identities = 64/110 (58%), Positives = 76/110 (69%)
 Frame = +1

Query: 424 EDEYQKLANSTIHYLLEKLEEYXXXXXXXXXXXXXXNEVLTVKLGDLGTYVINKQTPNRQ 603
           EDE+ KLA+STIH L EK EEY              NEVLT+KLGDLGTYV+NKQTPNRQ
Sbjct: 91  EDEFHKLADSTIHDLQEKFEEYGDGVQIDGFDIDYGNEVLTLKLGDLGTYVLNKQTPNRQ 150

Query: 604 IWMSSPVSGPLRFDWDHNAQAWIYRRTKANXXXXXXXXXXXXXXQPVKLS 753
           +W+SSPVSGP R+DWD NA+AW+YRRTKAN              +P+KL+
Sbjct: 151 LWLSSPVSGPSRYDWDRNAEAWVYRRTKANLFEVLESELEQVCGEPIKLA 200



 Score = 33.1 bits (74), Expect(2) = 5e-33
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = +3

Query: 216 HQLKPSFLAAEPFVSGHY------------RSFCSRSNSFVDGESQGPAAIDY 338
           H L+P FL A   ++ HY            R FCSR  + +D  SQGPA IDY
Sbjct: 35  HHLRPLFLEASRALN-HYSNAPDLLHSSSSRDFCSRPLN-LDAHSQGPATIDY 85


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score =  126 bits (316), Expect(2) = 7e-32
 Identities = 62/110 (56%), Positives = 72/110 (65%)
 Frame = +1

Query: 424 EDEYQKLANSTIHYLLEKLEEYXXXXXXXXXXXXXXNEVLTVKLGDLGTYVINKQTPNRQ 603
           EDE+ K+A+STI  L EK EEY              N+VLT+KLG LGTYV+NKQTPNRQ
Sbjct: 93  EDEFHKVADSTIQDLQEKFEEYGDCVQIDGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQ 152

Query: 604 IWMSSPVSGPLRFDWDHNAQAWIYRRTKANXXXXXXXXXXXXXXQPVKLS 753
           IW+SSPVSGP RFDWD +AQAW+YRRTKAN               P+ LS
Sbjct: 153 IWLSSPVSGPSRFDWDQSAQAWVYRRTKANLSKLLETELEKLCGTPISLS 202



 Score = 38.1 bits (87), Expect(2) = 7e-32
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = +3

Query: 96  LRNLSLLKRRTFSLWKSTNPTSNLMEKPFLSSYFSRGNYQHQLKPSFLAA---EPFVSGH 266
           LR LS   + + S   S++ +S+L  +P++    +        +PS LA      F+S  
Sbjct: 12  LRRLSRALKLSSSSSSSSSSSSSLSVRPYVFLLEAS-------RPSDLAKINLRSFLSVA 64

Query: 267 YRSFCSRSNSFVDGESQGPAAIDY 338
            RSFCSR+    D +SQGPAAIDY
Sbjct: 65  SRSFCSRTLDLED-DSQGPAAIDY 87


>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score =  125 bits (315), Expect(2) = 1e-31
 Identities = 60/110 (54%), Positives = 73/110 (66%)
 Frame = +1

Query: 424 EDEYQKLANSTIHYLLEKLEEYXXXXXXXXXXXXXXNEVLTVKLGDLGTYVINKQTPNRQ 603
           E E+ +LA+STIH L EKLE+Y              N+VLT+KLGDLGTYV+NKQTPNRQ
Sbjct: 82  EGEFHRLADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQ 141

Query: 604 IWMSSPVSGPLRFDWDHNAQAWIYRRTKANXXXXXXXXXXXXXXQPVKLS 753
           +W+SSPVSGP RFDWD + +AWIYRR KAN              +P+ LS
Sbjct: 142 LWLSSPVSGPSRFDWDRDTKAWIYRRNKANLYKILEGEFEQLCGKPIDLS 191



 Score = 37.7 bits (86), Expect(2) = 1e-31
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +3

Query: 111 LLKRRTFSLWKSTNPT-SNLMEKPFLSSYFSRGNYQHQLKPSFLAAEPFVSGHYRSFCSR 287
           LLKRR F   + + P+ S++   P LS   S   + ++      A  P +S   R+FCSR
Sbjct: 6   LLKRRLFRFLQLSQPSFSSIHAAPILSVKASEFMFPYKEN----ALLPPLSSSSRNFCSR 61

Query: 288 SNSFVDGESQGPAAIDY 338
           S  F   ESQGP  IDY
Sbjct: 62  S--FNLDESQGPLTIDY 76


>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  126 bits (316), Expect(2) = 8e-31
 Identities = 62/110 (56%), Positives = 72/110 (65%)
 Frame = +1

Query: 424 EDEYQKLANSTIHYLLEKLEEYXXXXXXXXXXXXXXNEVLTVKLGDLGTYVINKQTPNRQ 603
           EDE+ K+A+STI  L EK EEY              N+VLT+KLG LGTYV+NKQTPNRQ
Sbjct: 88  EDEFHKVADSTIQDLQEKFEEYGDCVQIDGFDIDYGNQVLTLKLGTLGTYVLNKQTPNRQ 147

Query: 604 IWMSSPVSGPLRFDWDHNAQAWIYRRTKANXXXXXXXXXXXXXXQPVKLS 753
           IW+SSPVSGP RFDWD +AQAW+YRRTKAN               P+ LS
Sbjct: 148 IWLSSPVSGPSRFDWDQSAQAWVYRRTKANLSKLLETELEKLCGTPISLS 197



 Score = 34.7 bits (78), Expect(2) = 8e-31
 Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = +3

Query: 225 KPSFLAA---EPFVSGHYRSFCSRSNSFVDGESQGPAAIDY 338
           +PS LA      F+S   RSFCSR+    D +SQGPAAIDY
Sbjct: 43  RPSDLAKINLRSFLSVASRSFCSRTLDLED-DSQGPAAIDY 82


>ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|222857770|gb|EEE95317.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  131 bits (329), Expect(2) = 1e-29
 Identities = 63/110 (57%), Positives = 74/110 (67%)
 Frame = +1

Query: 424 EDEYQKLANSTIHYLLEKLEEYXXXXXXXXXXXXXXNEVLTVKLGDLGTYVINKQTPNRQ 603
           EDE+  LA+STIH L EK EEY              NEVLT+KLGDLGTYV+NKQTPNRQ
Sbjct: 83  EDEFHSLADSTIHDLQEKFEEYGDSVQIDGFDIDYGNEVLTLKLGDLGTYVLNKQTPNRQ 142

Query: 604 IWMSSPVSGPLRFDWDHNAQAWIYRRTKANXXXXXXXXXXXXXXQPVKLS 753
           +W+SSPVSGP RFDWD + QAW+YRRTKAN              +P+KL+
Sbjct: 143 LWLSSPVSGPSRFDWDRSDQAWVYRRTKANLLNVLESEMGQLFGEPIKLA 192



 Score = 25.8 bits (55), Expect(2) = 1e-29
 Identities = 27/83 (32%), Positives = 35/83 (42%)
 Frame = +3

Query: 93  SLRNLSLLKRRTFSLWKSTNPTSNLMEKPFLSSYFSRGNYQHQLKPSFLAAEPFVSGHYR 272
           S+R LS L +  F      +P+S L+    L    SR    H    S     P     Y 
Sbjct: 8   SVRRLSTLLKHCFP-----SPSSFLVRSRSLLIQSSRTINHHSSSHS----PPLSRTFYS 58

Query: 273 SFCSRSNSFVDGESQGPAAIDYR 341
           S     NS    +++GPAAIDYR
Sbjct: 59  SPLLNLNST---DTEGPAAIDYR 78


Top