BLASTX nr result

ID: Cephaelis21_contig00015493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015493
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...    80   4e-13
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...    75   1e-11
ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790...    72   1e-10
ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796...    69   9e-10
ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804...    69   1e-09

>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 50/126 (39%), Positives = 65/126 (51%)
 Frame = -3

Query: 380 MDLDELRTILSKSRVDVWSLIDAAIAVAATDYGGKLKDRRDGIVQKLYFPTSISGSSGQL 201
           MD+D+ R+IL  S VDVW+ ID AI VA+ D+G +LK RRD IV+ LY       SS   
Sbjct: 1   MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLY-------SSSGR 53

Query: 200 CRNCHSDVGVREEDRVSHXXXXXXXXXXXXXXXXQVHGSSKSPLTPESNHKTDDINGVEN 21
           CRNC  DVG     R+++                   GS     TP S H  +D++ V +
Sbjct: 54  CRNCDLDVG-----RINNGHEIKERSHLESKGGGG-GGSGSPSTTPRSIHGDEDVDVVND 107

Query: 20  DDDGLD 3
           DDD  D
Sbjct: 108 DDDDDD 113


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 50/126 (39%), Positives = 65/126 (51%)
 Frame = -3

Query: 380 MDLDELRTILSKSRVDVWSLIDAAIAVAATDYGGKLKDRRDGIVQKLYFPTSISGSSGQL 201
           +DLD+ RTIL  + VDVW+ ID A+ VA+ DYG +LK+RRDGIV++LY  T    S    
Sbjct: 4   LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALT----SPPSR 59

Query: 200 CRNCHSDVGVREEDRVSHXXXXXXXXXXXXXXXXQVHGSSKSPLTPESNHKTDDINGVEN 21
           CRNC +D   R  D  S+                   GS +     E++  T     VE 
Sbjct: 60  CRNCDTD---RNHDGRSNGCEIK-------------QGSGE---VKEASPSTPQFVVVEG 100

Query: 20  DDDGLD 3
           DDDG D
Sbjct: 101 DDDGAD 106


>ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
          Length = 356

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = -3

Query: 380 MDLDELRTILSKSRVDVWSLIDAAIAVAATDYGGKLKDRRDGIVQKLYFPTSISGSSGQL 201
           MDLD+ R+IL  + VDVW  IDAAIAVA++D  G LK RRDGIV++LY  T    ++   
Sbjct: 1   MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAAT----AAPPW 56

Query: 200 CRNC----HSDVGVREEDRVSHXXXXXXXXXXXXXXXXQVHGSSKSPLTPESNHKTDDIN 33
           CRNC    H   G R + +  H                    ++ SP TP+S    +D  
Sbjct: 57  CRNCDEGGHRLNGHRIKKQSRHSPSPERQPHRST--------ATASPATPQSLDNGED-- 106

Query: 32  GVENDDDGLD 3
             E++D+ LD
Sbjct: 107 --EDNDEDLD 114


>ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
          Length = 314

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = -3

Query: 380 MDLDELRTILSKSRVDVWSLIDAAIAVAATDYGGKLKDRRDGIVQKLYFPTSISGSSGQL 201
           MD ++ R+IL  + VDVW+L+DAAIAVA+ D+  +LK RRDGIV++LY     + S   L
Sbjct: 1   MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLY----AASSPPPL 56

Query: 200 CRNCHSDVG 174
           CRNC +  G
Sbjct: 57  CRNCDAGDG 65


>ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
          Length = 361

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 44/124 (35%), Positives = 66/124 (53%)
 Frame = -3

Query: 380 MDLDELRTILSKSRVDVWSLIDAAIAVAATDYGGKLKDRRDGIVQKLYFPTSISGSSGQL 201
           MDLD+ R++L  + VDVW  IDAAIAVA+ D  G+LK RRDGIV++LY  T+ +    ++
Sbjct: 1   MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKC-RI 59

Query: 200 CRNCHSDVGVREEDRVSHXXXXXXXXXXXXXXXXQVHGSSKSPLTPESNHKTDDINGVEN 21
           C +  +D+   +  + S                     ++ SP TP+S         +EN
Sbjct: 60  CDDGGNDLNGHQIKKQSSPSPERQPHQRRAAAI----AAAASPATPQS---------LEN 106

Query: 20  DDDG 9
           D+DG
Sbjct: 107 DNDG 110


Top