BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015490
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34194.3| unnamed protein product [Vitis vinifera]              323   3e-86
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   323   3e-86
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   313   4e-83
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata...   300   3e-79
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   298   8e-79

>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  323 bits (828), Expect = 3e-86
 Identities = 165/241 (68%), Positives = 190/241 (78%), Gaps = 1/241 (0%)
 Frame = -2

Query: 723 LETMDESDVGIFCYISQLPGFRGILKQRYSDFIVNEVDLEGNVVHLTSLEAPAELVEEKE 544
           ++ ++ESDVGI  YISQLPGFRGILKQRY DFIVNEVD +GNVVHLTSL+AP E +E+ E
Sbjct: 1   MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 543 VMASDQPNAAYDAEIDSFRALAGEDNTGLLKSLVDQVVSGVKVDIEPILLSPSSDKSHRT 364
              SDQ N  Y +EI+ FR+L G+ +   LK L+DQV SG++  + PI+LS SSDKSHRT
Sbjct: 61  TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 363 AVHNFFKERLKFLVTDTVDGPDASSKCIRVRLNVGRNQVGG-XXXXXXXXXXXXXXXRGS 187
           AVHNFFKE LKFLVTDT+DGPD SSKCIRVRLN G +   G                RGS
Sbjct: 121 AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 186 ENWPEYLGKFLRFHLYKENKETQEAIGLIGKMLGIQPRSFGFAGTKDKRAVSTQRVTVFK 7
           +NW E++GKFLRFHLYKENK+TQEAIGLIGKMLGIQPRSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181 DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 6   Q 4
           Q
Sbjct: 241 Q 241


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  323 bits (828), Expect = 3e-86
 Identities = 165/241 (68%), Positives = 190/241 (78%), Gaps = 1/241 (0%)
 Frame = -2

Query: 723 LETMDESDVGIFCYISQLPGFRGILKQRYSDFIVNEVDLEGNVVHLTSLEAPAELVEEKE 544
           ++ ++ESDVGI  YISQLPGFRGILKQRY DFIVNEVD +GNVVHLTSL+AP E +E+ E
Sbjct: 1   MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNE 60

Query: 543 VMASDQPNAAYDAEIDSFRALAGEDNTGLLKSLVDQVVSGVKVDIEPILLSPSSDKSHRT 364
              SDQ N  Y +EI+ FR+L G+ +   LK L+DQV SG++  + PI+LS SSDKSHRT
Sbjct: 61  TKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRT 120

Query: 363 AVHNFFKERLKFLVTDTVDGPDASSKCIRVRLNVGRNQVGG-XXXXXXXXXXXXXXXRGS 187
           AVHNFFKE LKFLVTDT+DGPD SSKCIRVRLN G +   G                RGS
Sbjct: 121 AVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGS 180

Query: 186 ENWPEYLGKFLRFHLYKENKETQEAIGLIGKMLGIQPRSFGFAGTKDKRAVSTQRVTVFK 7
           +NW E++GKFLRFHLYKENK+TQEAIGLIGKMLGIQPRSFGFAGTKDKR+VSTQRVTVFK
Sbjct: 181 DNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFK 240

Query: 6   Q 4
           Q
Sbjct: 241 Q 241


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
           gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
           d, putative [Ricinus communis]
          Length = 753

 Score =  313 bits (801), Expect = 4e-83
 Identities = 166/246 (67%), Positives = 192/246 (78%), Gaps = 6/246 (2%)
 Frame = -2

Query: 723 LETMDESDVGIFCYISQLPGFRGILKQRYSDFIVNEVDLEGNVVHLTSLEAPAELVE--- 553
           + T++ESDVGI CYIS++PGFRGILKQRYSDFIVNEVD  GNVVHLTSL  P E+VE   
Sbjct: 49  MTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAE 108

Query: 552 EKEVMASDQPNAAYDAEIDSFRALAGEDNTGLLKSLVDQVVSGVK-VDIEPILLSPSSDK 376
           E+E   ++Q    Y AEI+SFR LAG+ +T  L++ ++QV+S    ++I PILLSP SDK
Sbjct: 109 EREEEITNQVGKNYAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDK 168

Query: 375 SHRTAVHNFFKERLKFLVTDTVDGPDASSKCIRVRLNVGRNQVGGXXXXXXXXXXXXXXX 196
           +HRTA HNFFKE+LKFLVTDTVDGPDASSKCIRVRLN   N   G               
Sbjct: 169 AHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPF 228

Query: 195 R--GSENWPEYLGKFLRFHLYKENKETQEAIGLIGKMLGIQPRSFGFAGTKDKRAVSTQR 22
              GS++WPE+LGKFLRFHLYKENK+TQEAIGLIGKMLGIQPRSFGFAGTKDKR+VSTQR
Sbjct: 229 DSRGSDHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQR 288

Query: 21  VTVFKQ 4
           VTVFKQ
Sbjct: 289 VTVFKQ 294


>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
           gi|297330312|gb|EFH60731.1| pseudouridylate synthase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  300 bits (767), Expect = 3e-79
 Identities = 153/250 (61%), Positives = 191/250 (76%), Gaps = 4/250 (1%)
 Frame = -2

Query: 738 KSTSSLETMDESDVGIFCYISQLPGFRGILKQR-YSDFIVNEVDLEGNVVHLTSLEAPAE 562
           K+   + T+DE+DVGI C+ISQLPGFRGILKQR Y+DFIVNEVD++GNVVHLTSL+ P E
Sbjct: 32  KTFEGMTTVDEADVGISCFISQLPGFRGILKQRSYADFIVNEVDIDGNVVHLTSLDLPPE 91

Query: 561 L--VEEKEVMASDQPNAAYDAEIDSFRALAGEDNTGLLKSLVDQVVSGVKVDIEPILLSP 388
           +   EE +   SD     Y + I+SFR+++   +   L++L++QV SG   +I P++L P
Sbjct: 92  MDVKEEDKTKTSDNVPQNYTSAIESFRSISSVTDAERLETLINQVTSGTDDEISPVVLDP 151

Query: 387 SSDKSHRTAVHNFFKERLKFLVTDTVDGPDASSKCIRVRLNVG-RNQVGGXXXXXXXXXX 211
           SSDKS RTA+HNF KE  KFLVTDTVDGPD++SKCIRVR+N G  N  G           
Sbjct: 152 SSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGD 211

Query: 210 XXXXXRGSENWPEYLGKFLRFHLYKENKETQEAIGLIGKMLGIQPRSFGFAGTKDKRAVS 31
                RGSE+WPE++GKFLRFHLYKENK+TQEA+GLIGKMLG+QP+SFGF+GTKDKR+VS
Sbjct: 212 KPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVS 271

Query: 30  TQRVTVFKQR 1
           TQRVTVFKQ+
Sbjct: 272 TQRVTVFKQQ 281


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
           gi|52354299|gb|AAU44470.1| hypothetical protein
           AT3G04820 [Arabidopsis thaliana]
           gi|61742699|gb|AAX55170.1| hypothetical protein
           At3g04820 [Arabidopsis thaliana]
           gi|332640619|gb|AEE74140.1| pseudouridine synthase
           [Arabidopsis thaliana]
          Length = 715

 Score =  298 bits (764), Expect = 8e-79
 Identities = 148/244 (60%), Positives = 189/244 (77%), Gaps = 3/244 (1%)
 Frame = -2

Query: 723 LETMDESDVGIFCYISQLPGFRGILKQRYSDFIVNEVDLEGNVVHLTSLEAPAELV--EE 550
           ++T+DE+DVGI C+ISQLPGFRGILKQRY+DFIVNEVD++GNVVHLTSL+ P E+   EE
Sbjct: 37  MKTVDEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDLPPEMAVKEE 96

Query: 549 KEVMASDQPNAAYDAEIDSFRALAGEDNTGLLKSLVDQVVSGVKVDIEPILLSPSSDKSH 370
            +  + D     Y + ++SF++++   +   L+ L++QV SG   ++ P++L PSSDKS 
Sbjct: 97  DKAKSCDNVPQNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLDPSSDKSK 156

Query: 369 RTAVHNFFKERLKFLVTDTVDGPDASSKCIRVRLNVG-RNQVGGXXXXXXXXXXXXXXXR 193
           RTA+HNF KE  KFLVTDTVDGPD++SKCIRVR+N G  N  G                R
Sbjct: 157 RTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKKRKERGDKPFDSR 216

Query: 192 GSENWPEYLGKFLRFHLYKENKETQEAIGLIGKMLGIQPRSFGFAGTKDKRAVSTQRVTV 13
           GSE+WPE++GKFLRFHLYKENK+TQEA+GLIGKMLG+QP+SFGF+GTKDKR+VSTQRVTV
Sbjct: 217 GSEHWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTV 276

Query: 12  FKQR 1
           FKQ+
Sbjct: 277 FKQQ 280