BLASTX nr result

ID: Cephaelis21_contig00015429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015429
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       57   1e-10
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                49   7e-09
ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lon...    49   7e-08
emb|CCH50976.1| T4.15 [Malus x robusta]                                46   1e-07
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    48   1e-07

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 56.6 bits (135), Expect(2) = 1e-10
 Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
 Frame = +3

Query: 1170 ALEKKVKEAPIDDKM*EARLRCAWHVENRE-----------SLNQIKRGRGRPKKTWKET 1316
            A+ ++V  API +KM E RLR   HVE R               Q  RGRGRPKKT +E 
Sbjct: 287  AIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIREV 346

Query: 1317 IKXXXXXXXXXXXXCIDPTQWRTLIHIAGLT 1409
            IK             +D T WR LIH+A  T
Sbjct: 347  IKKDLEINGLDRSMVLDRTLWRKLIHVADPT 377



 Score = 37.0 bits (84), Expect(2) = 1e-10
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +2

Query: 1103 VAEMKVLR*MCGYTRLDRICNECIRKK 1183
            VAEM++LR MCG TR D+I NE IR++
Sbjct: 265  VAEMRMLRWMCGKTRQDKIRNEAIRER 291


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 48.5 bits (114), Expect(2) = 7e-09
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
 Frame = +3

Query: 1173 LEKKVKEAPIDDKM*EARLRCAWHVENRES-----------LNQIKRGRGRPKKTWKETI 1319
            + +KV  A + DK+ EARLR   HV+ R +           +   +RGRGRPKK W+E I
Sbjct: 604  IREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVI 663

Query: 1320 KXXXXXXXXXXXXCIDPTQWRTLIHI 1397
            +             +D  +WR+ I +
Sbjct: 664  RQDLAMLHITEDMTLDRKEWRSRIKV 689



 Score = 39.3 bits (90), Expect(2) = 7e-09
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 1103 VAEMKVLR*MCGYTRLDRICNECIRKK 1183
            VAEM++LR MCG+TR D+I NE IR+K
Sbjct: 581  VAEMRMLRWMCGHTRSDKIRNEVIREK 607


>ref|ZP_11072118.1| hypothetical protein B879_04163 [Cecembia lonarensis LW9]
            gi|405551390|gb|EKB47241.1| hypothetical protein
            B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 48.9 bits (115), Expect(2) = 7e-08
 Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
 Frame = +3

Query: 1173 LEKKVKEAPIDDKM*EARLRCAWHVENRESLNQIKR-----------GRGRPKKTWKETI 1319
            ++ KV  A I+ KM E RLR   HV+ R +   ++R           GRGRP+KT +ET+
Sbjct: 43   IQGKVGVAEIEGKMRENRLRWFGHVQRRPTDAPVRRCDYGTEVRGRRGRGRPRKTLEETL 102

Query: 1320 KXXXXXXXXXXXXCIDPTQWRTLIHIAGLT 1409
            +              D  QWR+ IHIA  T
Sbjct: 103  RKDLEYLDLTEDMTQDRAQWRSRIHIADPT 132



 Score = 35.8 bits (81), Expect(2) = 7e-08
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +2

Query: 1103 VAEMKVLR*MCGYTRLDRICNECIRKK 1183
            VAEM++LR MCG+TR D+I NE I+ K
Sbjct: 20   VAEMRMLRGMCGHTRKDKIRNEDIQGK 46


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
 Frame = +3

Query: 1182 KVKEAPIDDKM*EARLRCAWHVENRESLNQIKR-----------GRGRPKKTWKETIKXX 1328
            KV  A I  KM E +LR   HV+ R +   I+R           GRGRP+KT +ET++  
Sbjct: 899  KVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGRRGRGRPRKTLEETLRKD 958

Query: 1329 XXXXXXXXXXCIDPTQWRTLIHIAGLT 1409
                        D  QWR+ IHIA  T
Sbjct: 959  LEYLDLTKDMTQDRAQWRSKIHIADPT 985



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 1103 VAEMKVLR*MCGYTRLDRICNECIRKK 1183
            VAEM++LR MCG+TR D+I NE IR K
Sbjct: 873  VAEMRMLRWMCGHTRKDKIRNEDIRGK 899


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
            gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 48.1 bits (113), Expect(2) = 1e-07
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
 Frame = +3

Query: 1173 LEKKVKEAPIDDKM*EARLRCAWHVENRESL-----------NQIKRGRGRPKKTWKETI 1319
            + ++V  API++K+ + RLR   H++ R                +KRGRGRP  TW E +
Sbjct: 127  IRERVGVAPIEEKLMQHRLRWFGHIQRRSDEAPVHIGIIRRPENVKRGRGRPTLTWTEAV 186

Query: 1320 KXXXXXXXXXXXXCIDPTQWRTLIHI 1397
            K             +D   W+  IH+
Sbjct: 187  KRDLKEWKIDKELAVDRKGWKCAIHV 212



 Score = 35.4 bits (80), Expect(2) = 1e-07
 Identities = 15/27 (55%), Positives = 23/27 (85%)
 Frame = +2

Query: 1103 VAEMKVLR*MCGYTRLDRICNECIRKK 1183
            VAEM++LR +CG+TR DR+ N+ IR++
Sbjct: 104  VAEMRMLRWICGHTRRDRVRNDDIRER 130


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