BLASTX nr result

ID: Cephaelis21_contig00015293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015293
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   536   e-150
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   525   e-146
ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   521   e-145
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   501   e-139

>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  536 bits (1381), Expect = e-150
 Identities = 263/356 (73%), Positives = 299/356 (83%)
 Frame = +2

Query: 155  MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 334
            MSK+L+QP+GQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQS TVYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 335  NVSKGVLAKSKDLVAAFGTDDQAKICLEILEKGELQVAGKERESQLSSQFKDVATIVMQK 514
            NVSKGVLAKSKDL  AFGTDDQ KICLEILEKGELQVAGKERESQL+SQF+D+AT+VMQK
Sbjct: 61   NVSKGVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQK 120

Query: 515  TINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLTV 694
            T+NPETQRPYTISMIERLMHEIHFAVDP+SSSKKQALEVIRELQKH+PIKRSPMRLRL +
Sbjct: 121  TVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAI 180

Query: 695  PEQNATSLLEKLNEWNVNIVARDRSGSQLSITCEMEPSLFRDCDAVVRNMQGRSEILAVN 874
             E N +SLLEKLN WN  +V++D SGSQLS+ CE++P LFR+CD +VRN+QGR EILA++
Sbjct: 181  SEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMS 240

Query: 875  VHVDSDTHVDNYDDHEDEPSKLRKDPVDSVPQLNDKMXXXXXXXXXXXXDGVKQNKCATC 1054
            VH + D HVD+YDD+ED P+ + K+  DSV QL++K+              VKQ+KC TC
Sbjct: 241  VHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKNEGEVKQHKCNTC 300

Query: 1055 NALVGDAKEYREHFKSEWHKHNLRRKTRQLPPLTADECMAXXXXXXXXXXXXXYSF 1222
            NA VGDAKEYR+HFKSEWHKHNLRRKTR L PLTA+EC+A             YSF
Sbjct: 301  NAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  525 bits (1352), Expect = e-146
 Identities = 264/358 (73%), Positives = 300/358 (83%), Gaps = 2/358 (0%)
 Frame = +2

Query: 155  MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 334
            MS+ + QP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKDLDEVLQS  VYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 335  NVSKGVLAKSKDLVAAFGTD-DQAKICLEILEKGELQVAGKERESQLSSQFKDVATIVMQ 511
            NVSKGVLAKSKDL AAFG + DQ +I LEIL+KGELQVAGKERESQLSSQF+D+ATIVMQ
Sbjct: 61   NVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 512  KTINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLT 691
            KTINPETQRPYT SMIERLMHEIHF+VDPNSSSKKQALEVIRELQKH+PIKR PMRLRLT
Sbjct: 121  KTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLT 180

Query: 692  VPEQNATSLLEKLNEWNVNIVARDRSGSQLSITCEMEPSLFRDCDAVVRNMQGRSEILAV 871
            VP+QN +SLLEKLN WN +IV++D SG QLSI CEMEP +FRDCDA+VRN+QGR EILAV
Sbjct: 181  VPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILAV 240

Query: 872  NVHVDSDTHVDNYDDHEDEPSKLRKDPVDSVPQLNDKMXXXXXXXXXXXXDG-VKQNKCA 1048
            ++H++ DTHVD+YDDHE  PS+L K+  D V QL++K+            +G VKQNKC+
Sbjct: 241  SLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKCS 300

Query: 1049 TCNALVGDAKEYREHFKSEWHKHNLRRKTRQLPPLTADECMAXXXXXXXXXXXXXYSF 1222
            TC+A VGD+K+YREHFKSEWHKHNL RKTRQLPPL+A+EC+              YSF
Sbjct: 301  TCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYSF 358


>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  521 bits (1342), Expect = e-145
 Identities = 257/356 (72%), Positives = 293/356 (82%)
 Frame = +2

Query: 155  MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 334
            MS  L+QPVGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQS TVYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 335  NVSKGVLAKSKDLVAAFGTDDQAKICLEILEKGELQVAGKERESQLSSQFKDVATIVMQK 514
            NVSKGVLAK+ DLV AFG DD  KICLEILEKGELQVAGKER+SQLSSQF+D+ATIVMQK
Sbjct: 61   NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK 120

Query: 515  TINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLTV 694
            TINPETQRPYTISM+ERLMHEIHFAVDP+SSSKKQAL+VIRELQKH+PIKRSPMRLRL V
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV 180

Query: 695  PEQNATSLLEKLNEWNVNIVARDRSGSQLSITCEMEPSLFRDCDAVVRNMQGRSEILAVN 874
              Q   +LLEKLN W+ N+V++D SGS  S+ CEM+P  FRDCDA+VRN+QGR EILAV+
Sbjct: 181  IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS 240

Query: 875  VHVDSDTHVDNYDDHEDEPSKLRKDPVDSVPQLNDKMXXXXXXXXXXXXDGVKQNKCATC 1054
            VH + DTHVD++DD+ED P  L K+  DS  QL++K+               KQNKC+TC
Sbjct: 241  VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEEKKADTLAKQNKCSTC 300

Query: 1055 NALVGDAKEYREHFKSEWHKHNLRRKTRQLPPLTADECMAXXXXXXXXXXXXXYSF 1222
            NA VGDAK++R+HFKS+WHKHNL+RKT+QLPPLTA+EC+A             YSF
Sbjct: 301  NAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  509 bits (1310), Expect = e-142
 Identities = 254/357 (71%), Positives = 291/357 (81%), Gaps = 1/357 (0%)
 Frame = +2

Query: 155  MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQ-TVY 331
            MS  L QPVGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQS  TVY
Sbjct: 1    MSVKLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVY 60

Query: 332  SNVSKGVLAKSKDLVAAFGTDDQAKICLEILEKGELQVAGKERESQLSSQFKDVATIVMQ 511
            SNVSKG+LAKS DL  AFG DDQ +ICLEIL+KGELQVAGKERESQLSSQF+D+ATIVMQ
Sbjct: 61   SNVSKGILAKSLDLNKAFGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 512  KTINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLT 691
            KTINPETQRPYTISMIERLMHE HFAV+P++SSKKQAL+VIRELQKH+PIKRSPMRL LT
Sbjct: 121  KTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLT 180

Query: 692  VPEQNATSLLEKLNEWNVNIVARDRSGSQLSITCEMEPSLFRDCDAVVRNMQGRSEILAV 871
            V  QN ++LLEKL  W+ N+V++D SGS+ SI CEM+P  FRDCD +VRN+QGR EILAV
Sbjct: 181  VSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQGRLEILAV 240

Query: 872  NVHVDSDTHVDNYDDHEDEPSKLRKDPVDSVPQLNDKMXXXXXXXXXXXXDGVKQNKCAT 1051
            +VH + DTHVD+YDD+ED PS L K   DS  QL++K+              VKQNKC+T
Sbjct: 241  SVHFEEDTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSDEKKAGAEVKQNKCST 300

Query: 1052 CNALVGDAKEYREHFKSEWHKHNLRRKTRQLPPLTADECMAXXXXXXXXXXXXXYSF 1222
            CN  VGDAK++R+HFKS+WHKHNL+RKT+QLPPLT++EC+              YSF
Sbjct: 301  CNVSVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSNTDIKEYSF 357


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  501 bits (1290), Expect = e-139
 Identities = 255/374 (68%), Positives = 294/374 (78%), Gaps = 18/374 (4%)
 Frame = +2

Query: 155  MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 334
            MSKTLVQPVGQKRLTNVAVVRLKK GNRFEIACYKNKVLSWRSGVEKD+DEVLQS TVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 335  NVSKGVLAKSKDLVAAFGTDDQAKICLEILEKGELQVAGKERESQLSSQFKDVATIVMQK 514
            NVSKGVLAKSKDL+ AFG+DD  KIC++ILEKGELQVAGKERESQ SSQF+D+ATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 515  TINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRSPMRLRLTV 694
            TINPETQRPYTI M+ERLMHEIHFAVDP+S+SKKQAL+VIRELQK +PIKRSPMRLRLTV
Sbjct: 121  TINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLTV 180

Query: 695  PEQNATSLLEKLNEWNVNIVARDRSGSQLSITCEMEPSLFRDCDAVVRNMQGRSEILAVN 874
            P QN  SLLEKL EW  ++V++D SG+Q+S  CEMEP LFR+CD+ VRNMQGR EILAV+
Sbjct: 181  PVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQGRLEILAVS 240

Query: 875  VHVDSDTHVDNYDDHEDEPSKLR----------KDPVDSVPQLNDKMXXXXXXXXXXXXD 1024
            VH + DT++D+YD+H+D   +            KD  D V +L+ KM            D
Sbjct: 241  VHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKM----QKQEISTAD 296

Query: 1025 GVKQ--------NKCATCNALVGDAKEYREHFKSEWHKHNLRRKTRQLPPLTADECMAXX 1180
             +KQ         KC+TCN  VG+AKEYREH KS+WHKHNL+RKTR+LPPL+A+ECM+  
Sbjct: 297  TIKQEGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAEECMSEI 356

Query: 1181 XXXXXXXXXXXYSF 1222
                       YSF
Sbjct: 357  DMDDSRADLKDYSF 370


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