BLASTX nr result

ID: Cephaelis21_contig00015256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015256
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   301   3e-80
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   299   1e-79
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   299   2e-79
ref|NP_172303.5| DNA polymerase epsilon subunit 1 [Arabidopsis t...   283   8e-75
gb|AAF18240.1|AC011438_2 T23G18.11 [Arabidopsis thaliana]             278   3e-73

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  301 bits (772), Expect = 3e-80
 Identities = 145/169 (85%), Positives = 153/169 (90%)
 Frame = +3

Query: 3   VKSDLMHIVERNRAKFDATDAYEFILTGKSNQRPQDFIDCITDLREYDVPYHVRFAIDND 182
           VKSDL+H+VERNRAKFDA +AYE ILTGKS QR QDFID I DLREYDVPYHVRFAID D
Sbjct: 152 VKSDLLHVVERNRAKFDAAEAYESILTGKSKQRTQDFIDYIVDLREYDVPYHVRFAIDKD 211

Query: 183 VRSGQWYDVTVSSLGLELKRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYM 362
           VR GQWYDV VSS G+ L+RRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYD +MMISYM
Sbjct: 212 VRCGQWYDVNVSSAGVMLERRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDLVMMISYM 271

Query: 363 VDGQGYLIINRECVGEDIEDLEYTPKPEFEGCFTVSNVKNEDGLLRQWF 509
           VDGQGYLIINRECVGEDIE+LEYTPKPEFEGCF V+NVKNE  LLR WF
Sbjct: 272 VDGQGYLIINRECVGEDIEELEYTPKPEFEGCFKVTNVKNEKELLRMWF 320


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
           predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  299 bits (766), Expect = 1e-79
 Identities = 140/169 (82%), Positives = 155/169 (91%)
 Frame = +3

Query: 3   VKSDLMHIVERNRAKFDATDAYEFILTGKSNQRPQDFIDCITDLREYDVPYHVRFAIDND 182
           VK DL+H+VERN+AK DA +AYE ILTGK  QRPQDF+DCI DLREYDVPYHVRFAIDND
Sbjct: 153 VKRDLLHVVERNQAKSDAAEAYESILTGKREQRPQDFLDCIIDLREYDVPYHVRFAIDND 212

Query: 183 VRSGQWYDVTVSSLGLELKRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYM 362
           +R GQWYDV+VSS G++L++RTDLLQRAEVHVCAFDIETTKLPLKFPDA+YD IMMISYM
Sbjct: 213 IRCGQWYDVSVSSTGVKLEKRTDLLQRAEVHVCAFDIETTKLPLKFPDADYDLIMMISYM 272

Query: 363 VDGQGYLIINRECVGEDIEDLEYTPKPEFEGCFTVSNVKNEDGLLRQWF 509
           VDGQGYLI NRECVGEDIEDLEYTPKPE+EGCF V+NVKNE  LL+QWF
Sbjct: 273 VDGQGYLITNRECVGEDIEDLEYTPKPEYEGCFKVTNVKNEVELLKQWF 321


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
           communis] gi|223531477|gb|EEF33309.1| DNA polymerase
           epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  299 bits (765), Expect = 2e-79
 Identities = 139/169 (82%), Positives = 153/169 (90%)
 Frame = +3

Query: 3   VKSDLMHIVERNRAKFDATDAYEFILTGKSNQRPQDFIDCITDLREYDVPYHVRFAIDND 182
           VK DL H+VERNRAKFD  DAYE +LTG+  QRPQDF+DCI DLREYDVPYHVRFAIDND
Sbjct: 154 VKKDLSHVVERNRAKFDTADAYESLLTGRREQRPQDFLDCIVDLREYDVPYHVRFAIDND 213

Query: 183 VRSGQWYDVTVSSLGLELKRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYM 362
           +R GQWYDV+VSS G+ L+RRTDLLQRAEV +CAFDIETTKLPLKFPDA+YD IMMISYM
Sbjct: 214 IRCGQWYDVSVSSSGVMLERRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYM 273

Query: 363 VDGQGYLIINRECVGEDIEDLEYTPKPEFEGCFTVSNVKNEDGLLRQWF 509
           +DGQG+LIINRECVGEDIEDLEYTPKPEFEGCF V+NVKNE  LL+QWF
Sbjct: 274 IDGQGFLIINRECVGEDIEDLEYTPKPEFEGCFKVTNVKNEVELLKQWF 322


>ref|NP_172303.5| DNA polymerase epsilon subunit 1 [Arabidopsis thaliana]
           gi|426019656|sp|F4HW04.1|DPOE1_ARATH RecName: Full=DNA
           polymerase epsilon catalytic subunit A; AltName:
           Full=DNA polymerase 2 a; Short=AtPOL2a; AltName:
           Full=DNA polymerase II subunit a; AltName: Full=Protein
           ABA OVERLY SENSITIVE a; AltName: Full=Protein EARLY IN
           SHORT DAYS 7; AltName: Full=Protein EMBRYO DEFECTIVE
           142; AltName: Full=Protein EMBRYO DEFECTIVE 2284;
           AltName: Full=Protein EMBRYO DEFECTIVE 529; AltName:
           Full=Protein TILTED 1 gi|332190145|gb|AEE28266.1| DNA
           polymerase epsilon subunit 1 [Arabidopsis thaliana]
          Length = 2161

 Score =  283 bits (725), Expect = 8e-75
 Identities = 136/169 (80%), Positives = 151/169 (89%)
 Frame = +3

Query: 3   VKSDLMHIVERNRAKFDATDAYEFILTGKSNQRPQDFIDCITDLREYDVPYHVRFAIDND 182
           VK DL+HIVERN+AKFDA +AYE IL GK  QRPQD +D I DLREYDVPYHVRFAIDND
Sbjct: 152 VKRDLLHIVERNQAKFDALEAYESILAGKREQRPQDCLDSIVDLREYDVPYHVRFAIDND 211

Query: 183 VRSGQWYDVTVSSLGLELKRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYM 362
           VRSGQWY+V++SS  + L++RTDLLQRAEV VCAFDIETTKLPLKFPDAEYD IMMISYM
Sbjct: 212 VRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETTKLPLKFPDAEYDQIMMISYM 271

Query: 363 VDGQGYLIINRECVGEDIEDLEYTPKPEFEGCFTVSNVKNEDGLLRQWF 509
           VDGQG+LIINRECVGED+EDLEYTPKPEFEG F V+NVKNE  LL++WF
Sbjct: 272 VDGQGFLIINRECVGEDVEDLEYTPKPEFEGYFKVTNVKNEVELLQRWF 320


>gb|AAF18240.1|AC011438_2 T23G18.11 [Arabidopsis thaliana]
          Length = 2271

 Score =  278 bits (711), Expect = 3e-73
 Identities = 136/172 (79%), Positives = 151/172 (87%), Gaps = 3/172 (1%)
 Frame = +3

Query: 3   VKSDLMHIVERNRAKFDATDAYEFILTGKSNQRPQDFIDCITDLREYDVPYHVRFAIDND 182
           VK DL+HIVERN+AKFDA +AYE IL GK  QRPQD +D I DLREYDVPYHVRFAIDND
Sbjct: 152 VKRDLLHIVERNQAKFDALEAYESILAGKREQRPQDCLDSIVDLREYDVPYHVRFAIDND 211

Query: 183 VRSGQWYDVTVSSLGLELKRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYM 362
           VRSGQWY+V++SS  + L++RTDLLQRAEV VCAFDIETTKLPLKFPDAEYD IMMISYM
Sbjct: 212 VRSGQWYNVSISSTDVILEKRTDLLQRAEVRVCAFDIETTKLPLKFPDAEYDQIMMISYM 271

Query: 363 VDGQGYLIINRE---CVGEDIEDLEYTPKPEFEGCFTVSNVKNEDGLLRQWF 509
           VDGQG+LIINRE   CVGED+EDLEYTPKPEFEG F V+NVKNE  LL++WF
Sbjct: 272 VDGQGFLIINREVTACVGEDVEDLEYTPKPEFEGYFKVTNVKNEVELLQRWF 323


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