BLASTX nr result

ID: Cephaelis21_contig00015255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015255
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vit...   218   2e-54
ref|XP_002315820.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-53
ref|XP_002518811.1| nucleic acid binding protein, putative [Rici...   213   6e-53
ref|XP_003538958.1| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-int...   209   1e-51
ref|XP_003607257.1| TIMELESS-interacting protein [Medicago trunc...   204   4e-50

>ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vitis vinifera]
            gi|297738277|emb|CBI27478.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  218 bits (556), Expect = 2e-54
 Identities = 103/177 (58%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
 Frame = -1

Query: 1047 AVPTGCYKCGRPGHWSRDCPLNPTNNNKDLDSDPTGGXXXXXXXXXXXXXXXXXSGSASE 868
            A PTGCYKCGRPGHWSRDCP + TN N + + +P                       +SE
Sbjct: 6    AAPTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNS---QNQYSSFNKGTASKPLAKSSE 62

Query: 867  KPRRIRKTRPKLTPDLLLSNDGLGHVLRHFPRAFKYRGRGHEVSDLGNLLGMYADWHSHL 688
            KP++  +TRP LTP+LLLS++GLG+VLRHFP AFK+RGRGHEVSDLGNL+G+Y++WHSHL
Sbjct: 63   KPKKAPRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIGLYSEWHSHL 122

Query: 687  LPYYSFDQFGHKVEQIGAKNRVKNCMRDLKERVASGVDPTKLHESQYQ-EDMSHHDQ 520
            LPYYSFDQF HKVE++G   RVK C+R+L+ERV +G D TK HE   + ED  +HDQ
Sbjct: 123  LPYYSFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHEPPVEHEDCPNHDQ 179


>ref|XP_002315820.1| predicted protein [Populus trichocarpa] gi|222864860|gb|EEF01991.1|
            predicted protein [Populus trichocarpa]
          Length = 283

 Score =  216 bits (549), Expect = 1e-53
 Identities = 106/173 (61%), Positives = 125/173 (72%), Gaps = 7/173 (4%)
 Frame = -1

Query: 1050 NAVPTGCYKCGRPGHWSRDCPLNPTNNNKDLDSDPTGGXXXXXXXXXXXXXXXXXSGS-- 877
            NA PTGCYKCGRPGHWSRDCP   +N N +  S+P                    SGS  
Sbjct: 5    NAAPTGCYKCGRPGHWSRDCP--DSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYFSGSNS 62

Query: 876  ----ASEKPRRIRKTRPKLTPDLLLSND-GLGHVLRHFPRAFKYRGRGHEVSDLGNLLGM 712
                A+EKP+++ ++RPKLTP+LLL  D GLG +LRHFPR FKYRGRGHEVSDLGNL+G+
Sbjct: 63   KPAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLGNLIGL 122

Query: 711  YADWHSHLLPYYSFDQFGHKVEQIGAKNRVKNCMRDLKERVASGVDPTKLHES 553
            Y++WHSHLLPYYSFDQF HKVEQ+ A  R K C+R+L+ERVASG DPTKL ES
Sbjct: 123  YSEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRES 175


>ref|XP_002518811.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223542192|gb|EEF43736.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 267

 Score =  213 bits (543), Expect = 6e-53
 Identities = 99/167 (59%), Positives = 122/167 (73%)
 Frame = -1

Query: 1053 GNAVPTGCYKCGRPGHWSRDCPLNPTNNNKDLDSDPTGGXXXXXXXXXXXXXXXXXSGSA 874
            G A PTGCYKCGRPGHWSRDCP + +N N      P+                   S   
Sbjct: 4    GKAAPTGCYKCGRPGHWSRDCPDSNSNPN------PSSSNPSNSKFPTSFPNTSTNSKPV 57

Query: 873  SEKPRRIRKTRPKLTPDLLLSNDGLGHVLRHFPRAFKYRGRGHEVSDLGNLLGMYADWHS 694
            +EKP+++ ++RPKLTPD+LL +DGLG+VLRHFPR FKYRGRGHEVSDLGNL+ +Y++WHS
Sbjct: 58   AEKPKKVPRSRPKLTPDILLGDDGLGYVLRHFPRNFKYRGRGHEVSDLGNLIRLYSEWHS 117

Query: 693  HLLPYYSFDQFGHKVEQIGAKNRVKNCMRDLKERVASGVDPTKLHES 553
             LLPYYS+D+F HKVEQ+ +  RV+ C+RDL+ERVASG DP KLHES
Sbjct: 118  RLLPYYSYDEFVHKVEQVASTKRVRVCLRDLRERVASGGDPMKLHES 164


>ref|XP_003538958.1| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-interacting protein-like
            [Glycine max]
          Length = 309

 Score =  209 bits (532), Expect = 1e-51
 Identities = 99/175 (56%), Positives = 123/175 (70%)
 Frame = -1

Query: 1059 GGGNAVPTGCYKCGRPGHWSRDCPLNPTNNNKDLDSDPTGGXXXXXXXXXXXXXXXXXSG 880
            G G    TGCYKCG+PGHWSRDCP +  N N + ++  T                     
Sbjct: 14   GTGAGTATGCYKCGKPGHWSRDCPFSAPNPNPNSNTATTPNPNTPNPSSSSFKSR----- 68

Query: 879  SASEKPRRIRKTRPKLTPDLLLSNDGLGHVLRHFPRAFKYRGRGHEVSDLGNLLGMYADW 700
            SA+EKP+++ +T+PKLTP+LLLS+DGLG+VLR+FPR FKYRGRGHEV DLGNLL +Y +W
Sbjct: 69   SATEKPKKLPRTKPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEW 128

Query: 699  HSHLLPYYSFDQFGHKVEQIGAKNRVKNCMRDLKERVASGVDPTKLHESQYQEDM 535
            HS LLPYYSF+QF HKVE++ A  RVK C+R+L+ERVASG DPTKL E     D+
Sbjct: 129  HSRLLPYYSFNQFVHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPVVHDI 183


>ref|XP_003607257.1| TIMELESS-interacting protein [Medicago truncatula]
            gi|355508312|gb|AES89454.1| TIMELESS-interacting protein
            [Medicago truncatula]
          Length = 286

 Score =  204 bits (518), Expect = 4e-50
 Identities = 96/178 (53%), Positives = 122/178 (68%)
 Frame = -1

Query: 1053 GNAVPTGCYKCGRPGHWSRDCPLNPTNNNKDLDSDPTGGXXXXXXXXXXXXXXXXXSGSA 874
            G+   TGCYKCGRPGHWSRDCP     +N +L+ +P                      SA
Sbjct: 3    GSGTATGCYKCGRPGHWSRDCPFTSPASNSNLNPNPNATTSTADPPPPTSTFKPSGPRSA 62

Query: 873  SEKPRRIRKTRPKLTPDLLLSNDGLGHVLRHFPRAFKYRGRGHEVSDLGNLLGMYADWHS 694
             EKP++  +TRPKLTP+LLLS+DGLG+VLR+FPR FKY GRGHEV DLG LL +Y+DWHS
Sbjct: 63   VEKPKKPPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGKLLHLYSDWHS 122

Query: 693  HLLPYYSFDQFGHKVEQIGAKNRVKNCMRDLKERVASGVDPTKLHESQYQEDMSHHDQ 520
             LLPYYSF+QF +KVE++ A  RVK  +R+L+ERVA+G DP+KL E    +D+   +Q
Sbjct: 123  RLLPYYSFNQFVNKVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVDDVPDGEQ 180


Top