BLASTX nr result

ID: Cephaelis21_contig00015236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015236
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   122   4e-26
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   119   3e-25
ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   119   3e-25
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          116   2e-24

>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = +3

Query: 69  ALQRHYAVLQALALDKDEMPDVKDETVPDDEGMARPGIVKVLEEFKLSVYGENYDDNNLA 248
           ALQRHYAVLQALAL++DEMP+ KDET+PD+EG+ARPG+VK +EEFKLSVYG+ YD+ NL 
Sbjct: 494 ALQRHYAVLQALALEEDEMPESKDETLPDEEGLARPGVVKAIEEFKLSVYGDKYDEENLL 553

Query: 249 ESGKATEASRKRKAIAE 299
            +GKA E SRKRKA AE
Sbjct: 554 GNGKANETSRKRKAAAE 570


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = +3

Query: 72  LQRHYAVLQALALDKDEMPDVKDETVPDDEGMARPGIVKVLEEFKLSVYGENYDDNNLAE 251
           LQRHYAVLQALALD+D+MP++ DET+PD+EGMARPG+VK +EEFKLSVYGENYD+ +   
Sbjct: 497 LQRHYAVLQALALDEDDMPEINDETLPDEEGMARPGVVKAVEEFKLSVYGENYDEESDMG 556

Query: 252 SGKATEASRKRKAIAE 299
           SGKA++AS+KRK  AE
Sbjct: 557 SGKASDASKKRKTAAE 572


>ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
           subunit KU70-like [Cucumis sativus]
          Length = 625

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = +3

Query: 69  ALQRHYAVLQALALDKDEMPDVKDETVPDDEGMARPGIVKVLEEFKLSVYGENYDDNNLA 248
           ALQRHYAVLQALAL++DEMP+V DETVPD+EGMARPG+VK LEEFKLSVYGENY++   A
Sbjct: 494 ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYEEEE-A 552

Query: 249 ESGKATEASRKRKAIAE 299
             GK +E S+KRKAI+E
Sbjct: 553 GKGKVSEVSKKRKAISE 569


>ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
           sativus]
          Length = 625

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = +3

Query: 69  ALQRHYAVLQALALDKDEMPDVKDETVPDDEGMARPGIVKVLEEFKLSVYGENYDDNNLA 248
           ALQRHYAVLQALAL++DEMP+V DETVPD+EGMARPG+VK LEEFKLSVYGENY++   A
Sbjct: 494 ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYEEEE-A 552

Query: 249 ESGKATEASRKRKAIAE 299
             GK +E S+KRKAI+E
Sbjct: 553 GKGKVSEVSKKRKAISE 569


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/76 (69%), Positives = 67/76 (88%)
 Frame = +3

Query: 72  LQRHYAVLQALALDKDEMPDVKDETVPDDEGMARPGIVKVLEEFKLSVYGENYDDNNLAE 251
           LQRHYAVLQALALD+D+MP++ DET+PD+EGMARPG+VK +EEFKLSVYGENYD+ +   
Sbjct: 496 LQRHYAVLQALALDEDDMPEINDETLPDEEGMARPGVVKAVEEFKLSVYGENYDEESDMG 555

Query: 252 SGKATEASRKRKAIAE 299
           +GKA++AS+KRK   E
Sbjct: 556 NGKASDASKKRKTAVE 571


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