BLASTX nr result

ID: Cephaelis21_contig00015215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015215
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   149   8e-34
ref|XP_002310275.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   147   4e-33
ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   144   2e-32
ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago trunca...   136   5e-30

>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  149 bits (376), Expect = 8e-34
 Identities = 94/196 (47%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
 Frame = +3

Query: 261 RHSKSTSRTQNNARRCLEINYA---ETHVPKPPIFSFKPANLTTAVQESNPPPAPTERVS 431
           RH +  S   +  R+ L  N     ++ +P+ P   ++    T+  QE NPP AP+++V+
Sbjct: 2   RHFRLISPHLSRIRKTLFRNPTFNPQSTIPRSPNLIYQ---FTSIAQEPNPP-APSDKVA 57

Query: 432 AVVDELIQLTLLEIMELNELLRQKSGIQDMPTMAVMMPXXXXXXXXXXXXXXXXXXXXXX 611
           A+VDE+ +LTLLEI +L E+LR K  I++MP MAVMMP                      
Sbjct: 58  ALVDEISELTLLEISDLTEVLRNKLDIKEMPVMAVMMPGMGFSGMKGGVKGGAAGAAKAE 117

Query: 612 XXXXX--FDLKLDGGFDPAAKIKIIKEVRACTSLGLKEAKDLVEKAPTVLKKGVTKEEAQ 785
                  FD+KL+G FD AAKIK+IKEVR  T LGLKEAKDLVEKAPT+LKKGVTKEEA+
Sbjct: 118 EKVEKTVFDVKLEG-FDAAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLKKGVTKEEAE 176

Query: 786 NIIEKMEGVGAKVTME 833
            I  KM+ VGAKV+ME
Sbjct: 177 KITAKMKEVGAKVSME 192


>ref|XP_002310275.1| predicted protein [Populus trichocarpa] gi|222853178|gb|EEE90725.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  147 bits (371), Expect = 3e-33
 Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 4/147 (2%)
 Frame = +3

Query: 405 PPAPTERVSAVVDELIQLTLLEIMELNELLRQKSGIQDMPTMAVMMPXXXXXXXXXXXXX 584
           PP  T+RVS++VDEL +LTLLE+ +L E+LR K  I++MP MAVMMP             
Sbjct: 2   PPPSTDRVSSIVDELSKLTLLEVSDLTEVLRTKLEIKEMPVMAVMMPGMGFSMGAGMKGG 61

Query: 585 XXXXXXXXXXXXXX----FDLKLDGGFDPAAKIKIIKEVRACTSLGLKEAKDLVEKAPTV 752
                             FD+KL+G FD A KIK+IKEVR  T LGLKEAKDLVEKAPT+
Sbjct: 62  GGGGAAAAKAEEKVEKTVFDVKLEG-FDAAVKIKVIKEVRGFTDLGLKEAKDLVEKAPTL 120

Query: 753 LKKGVTKEEAQNIIEKMEGVGAKVTME 833
           LKKGVTK+EA+ IIEKM+GVGAKVTME
Sbjct: 121 LKKGVTKDEAEKIIEKMKGVGAKVTME 147


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  147 bits (370), Expect = 4e-33
 Identities = 87/156 (55%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = +3

Query: 372 NLTTAVQESNPPPAPTERVSAVVDELIQLTLLEIMELNELLRQKSGIQDMPTMAVMMPXX 551
           N TTA  ES P  AP+ERVSA+VDE+  LTLLE+ +L E+LR+K  +++MP M +MMP  
Sbjct: 50  NYTTASPESRP--APSERVSAIVDEISGLTLLEVADLTEVLREKLDVKEMPVMTMMMPGM 107

Query: 552 XXXXXXXXXXXXXXXXXXXXXXXXX--FDLKLDGGFDPAAKIKIIKEVRACTSLGLKEAK 725
                                      FD+KLD  FD A+KIKIIKEVR  T+LGLKEAK
Sbjct: 108 GFGGFRGAGKGGPGAKGVEEKKEEKTAFDVKLDA-FDAASKIKIIKEVRTFTNLGLKEAK 166

Query: 726 DLVEKAPTVLKKGVTKEEAQNIIEKMEGVGAKVTME 833
           DLVEKAPT+LKKGVTKEEA+ II KM+ VGAKV+ME
Sbjct: 167 DLVEKAPTLLKKGVTKEEAETIIAKMKEVGAKVSME 202


>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  144 bits (363), Expect = 2e-32
 Identities = 85/153 (55%), Positives = 101/153 (66%)
 Frame = +3

Query: 375 LTTAVQESNPPPAPTERVSAVVDELIQLTLLEIMELNELLRQKSGIQDMPTMAVMMPXXX 554
           L   ++ ++    P+ERVS++VDE+  LTLLE+ +L ELLR+K  I +MP MAVMMP   
Sbjct: 39  LNFVLKYTSSAQVPSERVSSIVDEISGLTLLEVSDLTELLRKKLDINEMPVMAVMMPGMG 98

Query: 555 XXXXXXXXXXXXXXXXXXXXXXXXFDLKLDGGFDPAAKIKIIKEVRACTSLGLKEAKDLV 734
                                   FDLKL+  FD AAKIKIIKEVR  T LGLKEAKDLV
Sbjct: 99  FGVRGAGGAAPKAAEVKAAEKTA-FDLKLEA-FDAAAKIKIIKEVRTFTDLGLKEAKDLV 156

Query: 735 EKAPTVLKKGVTKEEAQNIIEKMEGVGAKVTME 833
           E APT+LKKGV KEEA+NIIEKM+ VGAKVTME
Sbjct: 157 EHAPTLLKKGVPKEEAENIIEKMKAVGAKVTME 189


>ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago truncatula]
           gi|355523407|gb|AET03861.1| 50S ribosomal protein L12-2
           [Medicago truncatula] gi|388508470|gb|AFK42301.1|
           unknown [Medicago truncatula]
          Length = 195

 Score =  136 bits (343), Expect = 5e-30
 Identities = 82/179 (45%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
 Frame = +3

Query: 318 NYAETHVPKPPIFSFKPANLTTAVQESNPPPAPTERVSAVVDELIQLTLLEIMELNELLR 497
           N+    +PKP I    P N  + ++  N      E VSA+V+EL  LTL+E M+L E++R
Sbjct: 21  NFLSPQIPKPYII---PPNPKSHLRNYNTDSPNHENVSAIVEELAGLTLIEAMDLVEVMR 77

Query: 498 QKSGIQDMPTMAVMMPXXXXXXXXXXXXXXXXXXXXXXXXXXX-------FDLKLDGGFD 656
           +K GI ++P M +M+P                                  FD+KLDG FD
Sbjct: 78  EKKGINELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGGEVKKVEEKTAFDVKLDG-FD 136

Query: 657 PAAKIKIIKEVRACTSLGLKEAKDLVEKAPTVLKKGVTKEEAQNIIEKMEGVGAKVTME 833
            A+KIK+IKEVR+ TSLGLKEAKDLVEK+PT+LKKGVTKEEA+ II K++ VGAK +ME
Sbjct: 137 AASKIKVIKEVRSFTSLGLKEAKDLVEKSPTLLKKGVTKEEAEGIIAKLKEVGAKASME 195


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