BLASTX nr result

ID: Cephaelis21_contig00015118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015118
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    57   1e-06
emb|CBI34215.3| unnamed protein product [Vitis vinifera]               57   1e-06
emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]    56   3e-06
ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana] ...    55   5e-06
gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidops...    55   5e-06

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/69 (46%), Positives = 37/69 (53%)
 Frame = +2

Query: 101 SSAQALPLSYRKLMTDPLSPILDFYPSGTFHSVLLIFCLCFCFPISQIKWRLHFVDFELD 280
           +SA +LP +YRKLMTD  SPILDFYPS                            DFE+D
Sbjct: 526 ASASSLPENYRKLMTDQSSPILDFYPS----------------------------DFEID 557

Query: 281 MNGKRHAWQ 307
           MNGKR+AWQ
Sbjct: 558 MNGKRYAWQ 566


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/69 (46%), Positives = 37/69 (53%)
 Frame = +2

Query: 101 SSAQALPLSYRKLMTDPLSPILDFYPSGTFHSVLLIFCLCFCFPISQIKWRLHFVDFELD 280
           +SA +LP +YRKLMTD  SPILDFYPS                            DFE+D
Sbjct: 768 ASASSLPENYRKLMTDQSSPILDFYPS----------------------------DFEID 799

Query: 281 MNGKRHAWQ 307
           MNGKR+AWQ
Sbjct: 800 MNGKRYAWQ 808


>emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
          Length = 1102

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/69 (46%), Positives = 35/69 (50%)
 Frame = +2

Query: 104 SAQALPLSYRKLMTDPLSPILDFYPSGTFHSVLLIFCLCFCFPISQIKWRLHFVDFELDM 283
           SA ALPL YRKLM D  SPILDFYP+                            DFELDM
Sbjct: 694 SAHALPLYYRKLMMDETSPILDFYPA----------------------------DFELDM 725

Query: 284 NGKRHAWQV 310
           NGKR+ WQ+
Sbjct: 726 NGKRYPWQL 734


>ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
           gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3'
           exoribonuclease 4; AltName: Full=Protein ACC INSENSITIVE
           1; AltName: Full=Protein ETHYLENE INSENSITIVE 5;
           AltName: Full=Protein EXORIBONUCLEASE 4
           gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis
           thaliana] gi|17381112|gb|AAL36368.1| putative
           exonuclease [Arabidopsis thaliana]
           gi|20259665|gb|AAM14350.1| putative exonuclease
           [Arabidopsis thaliana] gi|109627646|gb|ABG34298.1|
           At1g54490 [Arabidopsis thaliana]
           gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4
           [Arabidopsis thaliana]
          Length = 947

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 35/69 (50%)
 Frame = +2

Query: 101 SSAQALPLSYRKLMTDPLSPILDFYPSGTFHSVLLIFCLCFCFPISQIKWRLHFVDFELD 280
           +S+ ALP  YRKLMTDP SPIL FYP+                            DFELD
Sbjct: 534 ASSNALPGEYRKLMTDPSSPILKFYPA----------------------------DFELD 565

Query: 281 MNGKRHAWQ 307
           MNGKR AWQ
Sbjct: 566 MNGKRFAWQ 574


>gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
          Length = 965

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/69 (46%), Positives = 35/69 (50%)
 Frame = +2

Query: 101 SSAQALPLSYRKLMTDPLSPILDFYPSGTFHSVLLIFCLCFCFPISQIKWRLHFVDFELD 280
           +S+ ALP  YRKLMTDP SPIL FYP+                            DFELD
Sbjct: 523 ASSNALPGEYRKLMTDPSSPILKFYPA----------------------------DFELD 554

Query: 281 MNGKRHAWQ 307
           MNGKR AWQ
Sbjct: 555 MNGKRFAWQ 563


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