BLASTX nr result

ID: Cephaelis21_contig00015068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00015068
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   105   2e-20
ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncat...   105   3e-20
ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   104   4e-20
gb|AFK49219.1| unknown [Lotus japonicus]                              103   1e-19
ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   102   2e-19

>ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 300

 Score =  105 bits (263), Expect = 2e-20
 Identities = 49/85 (57%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = -3

Query: 398 MHGWEATVKNIWVYKIDPARKEIDM-GERPGAWCHRKFIKDSIFKKPDISMLPFPTYFAP 222
           M G + TVKN+WVYKIDPAR  + + G+ PGA  +  FIKD++++KPDIS+LPFPTYF P
Sbjct: 216 MGGDQRTVKNVWVYKIDPARNLMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVP 275

Query: 221 EDKDLSKLEHVIADLGDTDPFMAAD 147
           ED+D+  L+ ++A+LGD DPFM  D
Sbjct: 276 EDEDIDNLKPLVAELGDVDPFMVTD 300



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 1032 PPHIASLSPSTQQ-QHRFIEAKPWPMTLNSRRTGAIVFNCVMTALWDKCGARVPVTFFSV 856
            P  + SLS      Q R IE KP  MT NS+RTG I   C M+ALWDK GAR+P+T   V
Sbjct: 21   PSPLRSLSSDAAAIQTRIIEPKPSVMTPNSKRTGLIAVKCGMSALWDKWGARIPITVLWV 80

Query: 855  NDNIVTQIKTPNKDGIIALQV 793
            +DNIV+Q+KTP K+G  ALQ+
Sbjct: 81   DDNIVSQVKTPEKEGFCALQI 101


>ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncatula]
           gi|355493293|gb|AES74496.1| 50S ribosomal protein L3-2
           [Medicago truncatula]
          Length = 294

 Score =  105 bits (261), Expect = 3e-20
 Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 398 MHGWEATVKNIWVYKIDPARKEIDM-GERPGAWCHRKFIKDSIFKKPDISMLPFPTYFAP 222
           M G + TVKN+WVYKIDPAR  + + G+ PGA  +  FIKD++++KPD S+LPFPTYF P
Sbjct: 210 MGGKQRTVKNVWVYKIDPARNLMWVKGQVPGATGNFVFIKDAVYEKPDTSILPFPTYFVP 269

Query: 221 EDKDLSKLEHVIADLGDTDPFMAAD 147
           ED+D   +E +IADLGD DPFM  D
Sbjct: 270 EDEDTDDMEPLIADLGDVDPFMVVD 294



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 987 RFIEAKPWPMTLNSRRTGAIVFNCVMTALWDKCGARVPVTFFSVNDNIVTQIKTPNKDGI 808
           R IEAKP  MT NSRRTG +   C MTA WDK GAR+P++   V+DNIV+Q+KTP K+G 
Sbjct: 32  RTIEAKPSVMTPNSRRTGLVAVKCGMTAHWDKWGARIPISILWVDDNIVSQVKTPEKEGY 91

Query: 807 IALQV 793
            +LQ+
Sbjct: 92  CSLQI 96


>ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 299

 Score =  104 bits (260), Expect = 4e-20
 Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -3

Query: 398 MHGWEATVKNIWVYKIDPARKEIDM-GERPGAWCHRKFIKDSIFKKPDISMLPFPTYFAP 222
           M G + TVKN+WVYKIDPAR  + + G+ PGA  +  FIKD++++KPDIS+LPFPTYF P
Sbjct: 215 MGGDQRTVKNVWVYKIDPARNLMWVKGQVPGATGNFVFIKDAVYEKPDISLLPFPTYFVP 274

Query: 221 EDKDLSKLEHVIADLGDTDPFMAAD 147
           ED+D   L+ ++A+LGD DPFM  D
Sbjct: 275 EDEDTDNLKPLVAELGDVDPFMVTD 299



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = -2

Query: 987 RFIEAKPWPMTLNSRRTGAIVFNCVMTALWDKCGARVPVTFFSVNDNIVTQIKTPNKDGI 808
           R IE KP  MT NS+RTG I   C M+ALWDK GAR+P+T   V+DNIV+QIKTP K+G 
Sbjct: 36  RIIEPKPSAMTPNSKRTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGF 95

Query: 807 IALQV 793
            ALQ+
Sbjct: 96  CALQI 100


>gb|AFK49219.1| unknown [Lotus japonicus]
          Length = 128

 Score =  103 bits (256), Expect = 1e-19
 Identities = 46/85 (54%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -3

Query: 398 MHGWEATVKNIWVYKIDPARKEIDM-GERPGAWCHRKFIKDSIFKKPDISMLPFPTYFAP 222
           M G + TVKN+W+YKIDPAR  + + G+ PGA  +  F+ D++++KPDIS+LPFPTYF P
Sbjct: 44  MGGVQRTVKNVWIYKIDPARNLMWVKGQVPGATGNFVFVTDAVYEKPDISILPFPTYFVP 103

Query: 221 EDKDLSKLEHVIADLGDTDPFMAAD 147
           ED+D+  ++ ++ADLGD DPFM  D
Sbjct: 104 EDEDIDNMKPLVADLGDVDPFMITD 128


>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score =  102 bits (255), Expect = 2e-19
 Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = -3

Query: 398 MHGWEATVKNIWVYKIDPARKEIDM-GERPGAWCHRKFIKDSIFKKPDISMLPFPTYFAP 222
           M G + TVKN+WVYKIDP R  + + G+ PGA  +  FIKD+++KKPD S+LPFPTYF  
Sbjct: 223 MGGKQRTVKNVWVYKIDPTRNLMWVRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPA 282

Query: 221 EDKDLSKLEHVIADLGDTDPFMAAD 147
           ED+D + LE ++ADLGD DPFM AD
Sbjct: 283 EDEDPTVLEPIVADLGDIDPFMVAD 307



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 38/68 (55%), Positives = 50/68 (73%)
 Frame = -2

Query: 996 QQHRFIEAKPWPMTLNSRRTGAIVFNCVMTALWDKCGARVPVTFFSVNDNIVTQIKTPNK 817
           ++ R I  KP  M+ NS+RTGAI   C M+ALWDK GARVP+T   ++DNIV+Q+KT  K
Sbjct: 41  EEPRIIVPKPGVMSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEK 100

Query: 816 DGIIALQV 793
           +G+ ALQV
Sbjct: 101 EGLNALQV 108



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 11/70 (15%)
 Frame = -1

Query: 616 QIGCGRSI*QNLWWAISELEVS-------P*RRSL----VTEDALLPVGTSIGVRHFHPG 470
           Q+GCG+   ++L    ++ EV        P +R L    VTEDALLPVGT+IGVRHF PG
Sbjct: 107 QVGCGQKKAKHL----TKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPG 162

Query: 469 QFVGITGITR 440
           Q+V +TGITR
Sbjct: 163 QYVDVTGITR 172


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