BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014454
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   124   9e-27
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...   107   1e-21
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...   105   6e-21
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...    99   4e-19
gb|ABK94132.1| unknown [Populus trichocarpa]                           99   4e-19

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  124 bits (311), Expect = 9e-27
 Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = -1

Query: 261 SVWSRAFSTQAGTSTLGESSVAD-GKFTGKIFASYSVYKGKAALSASPRLPTFAKLQSGG 85
           S+W  A +T AG ST+ ++ VAD GK  G++FA YSV+KGKAALSA PRLPTF +L SGG
Sbjct: 27  SIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGG 86

Query: 84  VKVDRKGTIMLTFWPAIGERKYDWEKKQ 1
           VK++R+G IMLTFWP++GERKYDWEK+Q
Sbjct: 87  VKLNRRGVIMLTFWPSVGERKYDWEKRQ 114


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -1

Query: 192 GKFTGKIFASYSVYKGKAALSASPRLPTFAKLQSGGVKVDRKGTIMLTFWPAIGERKYDW 13
           GK  G++FA YSV+KGKAALSA PRLPTF +L SGGVK++R+G IMLTFWP++GERKYDW
Sbjct: 5   GKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64

Query: 12  EKKQ 1
           EK+Q
Sbjct: 65  EKRQ 68


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score =  105 bits (261), Expect = 6e-21
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -1

Query: 192 GKFTGKIFASYSVYKGKAALSASPRLPTFAKLQSGGVKVDRKGTIMLTFWPAIGERKYDW 13
           GK  G++FA YSV+KG AALSA PRLPTF +L SGGVK++R+G IMLTFWP++GERKYDW
Sbjct: 5   GKREGRVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDW 64

Query: 12  EKKQ 1
           EK+Q
Sbjct: 65  EKRQ 68


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/88 (51%), Positives = 60/88 (68%)
 Frame = -1

Query: 264 NSVWSRAFSTQAGTSTLGESSVADGKFTGKIFASYSVYKGKAALSASPRLPTFAKLQSGG 85
           N  W  AF+++   ST  +     G +  +++A Y VYKGKA+L+  P LP F++L SGG
Sbjct: 28  NPSWLHAFTSRVSLSTATDHFADKGNYPDRVYAPYCVYKGKASLTVYPVLPKFSRLDSGG 87

Query: 84  VKVDRKGTIMLTFWPAIGERKYDWEKKQ 1
           +KVDR G +ML F PA+GERKYDWEKKQ
Sbjct: 88  LKVDRHGVMMLQFSPAVGERKYDWEKKQ 115


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/91 (56%), Positives = 69/91 (75%)
 Frame = -1

Query: 273 KDGNSVWSRAFSTQAGTSTLGESSVADGKFTGKIFASYSVYKGKAALSASPRLPTFAKLQ 94
           +DG+++ +  F  QA  ST G+SS+ D     ++FA YSV+KGKAALS  P LPTF+K  
Sbjct: 22  RDGSALHALTF--QASISTGGKSSIQD-----RVFAPYSVFKGKAALSVEPVLPTFSKFG 74

Query: 93  SGGVKVDRKGTIMLTFWPAIGERKYDWEKKQ 1
           SG ++VDR+G++MLTF PAIGERKYD+EK+Q
Sbjct: 75  SGNLRVDRRGSMMLTFLPAIGERKYDYEKRQ 105