BLASTX nr result

ID: Cephaelis21_contig00014395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014395
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314172.1| GRAS family transcription factor [Populus tr...    66   1e-08
ref|XP_002299867.1| GRAS family transcription factor [Populus tr...    65   1e-08
gb|ADL36814.1| SCL domain class transcription factor [Malus x do...    62   2e-07
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...    60   3e-07
gb|ADL36822.1| SCL domain class transcription factor [Malus x do...    59   1e-06

>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850580|gb|EEE88127.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 762

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
 Frame = +2

Query: 269 EIVVPGYEEYHSLLNGFKINDQSSGFI---FLITWSWPRNLAFSSWIP-----EVESADA 424
           EIV P   +Y ++ NGFKI D     +    ++    P N A SS          +  D+
Sbjct: 19  EIVFPVSNQYQNVTNGFKIEDLDLDHLENPLVLPDPDPGNSALSSITSMDGDSPSDDNDS 78

Query: 425 DPVLRHLCQILLEETVDEKPSTLHDPLALQAAEKSFYDV 541
           + +L+++ Q+L+EE ++EKP   HDPLALQAAE+S YD+
Sbjct: 79  ENLLKYISQMLMEENMEEKPCMFHDPLALQAAERSLYDI 117


>ref|XP_002299867.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847125|gb|EEE84672.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 757

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
 Frame = +2

Query: 269 EIVVPGYEEYHSLLNGFKINDQSSGFI---FLITWSWPRNLAFSSWIPE---VESADADP 430
           EIV P   +YH++ NGFK  D     +    ++    P  L+  + I E    +  D++ 
Sbjct: 19  EIVFPDSNQYHNVSNGFKFEDLDFDCVENPLVLPDPDPGALSSITAIDEDSPSDDNDSEN 78

Query: 431 VLRHLCQILLEETVDEKPSTLHDPLALQAAEKSFYDV 541
           +L+++ Q+L+EE ++EKP   HDPLALQAAE+S YD+
Sbjct: 79  LLKYINQMLMEEDMEEKPCMFHDPLALQAAERSLYDI 115


>gb|ADL36814.1| SCL domain class transcription factor [Malus x domestica]
          Length = 672

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
 Frame = +2

Query: 302 SLLNGFKINDQSSGFIFLITWS-WPRNLAFSSWIPEVESADAD----PVLRHLCQILLEE 466
           +L+NGF++N + +  +FL   S  P    FSS   + ++ D      PVL+++  ILLEE
Sbjct: 52  NLVNGFQVNHEPTNTLFLPPNSDHPSESEFSSSGSDGDTFDISVCNHPVLKYISDILLEE 111

Query: 467 TVDEKPSTLHDPLALQAAEKSFYDV*YP 550
            ++ KP  L D LALQAAEKSFYDV  P
Sbjct: 112 DLEGKPCMLQDCLALQAAEKSFYDVLKP 139


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
           gi|223526341|gb|EEF28640.1| transcription factor,
           putative [Ricinus communis]
          Length = 764

 Score = 59.7 bits (143), Expect(2) = 3e-07
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
 Frame = +2

Query: 269 EIVVPGYEEYHSLLNGFKINDQSSGFIF-------LITWSWPRNLAFSSWI------PEV 409
           EI  P   +Y +  NG+K ND +    F       ++  S P   A SS        P  
Sbjct: 18  EIDFPDLHQYPTFTNGYKSNDPTFDIDFNFVDTSLVLLDSDPSRSAPSSVATMEGDSPSD 77

Query: 410 ESADADPVLRHLCQILLEETVDEKPSTLHDPLALQAAEKSFYDV 541
           ++  ++ VL ++ Q+L+EE +++KP   HDPLALQAAE+S YDV
Sbjct: 78  DNDFSETVLNYISQMLMEEDMEQKPCMFHDPLALQAAERSLYDV 121



 Score = 21.2 bits (43), Expect(2) = 3e-07
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 537 MYDTLCQEYPPSP 575
           +YD L ++YP SP
Sbjct: 118 LYDVLGEKYPSSP 130


>gb|ADL36822.1| SCL domain class transcription factor [Malus x domestica]
          Length = 684

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = +2

Query: 302 SLLNGFKINDQSSGFIFL-ITWSWPRNLAFSSWIPE---VESADADPVLRHLCQILLEET 469
           +L+NGF++N + +  +FL  T   P +   SS   +    + +D+ PVL+++  ILLEE 
Sbjct: 22  NLVNGFQVNHEPTNPLFLPTTTDHPTDSGLSSSGSDGDCFDISDSRPVLKYISDILLEED 81

Query: 470 VDEKPSTLHDPLALQAAEKSFYDV 541
           +++KP  L + LAL AAEKSFYDV
Sbjct: 82  LEDKPCMLQNCLALLAAEKSFYDV 105


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