BLASTX nr result

ID: Cephaelis21_contig00014280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014280
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumba...    96   3e-18
ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...    84   2e-14
ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis...    84   2e-14
gb|AFK42319.1| unknown [Lotus japonicus]                               81   8e-14
ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]     79   5e-13

>emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
          Length = 406

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = +1

Query: 4   MPGFSAADLVAYERQLALSKMAGAQALMHPQGQRIGTANQAIYDGGYAGIATTQPPMYY 180
           +PG SA DL AY+RQLAL+KMAGAQA M PQGQRIG   Q IYDGGY GIA+TQPPMY+
Sbjct: 348 IPGLSAMDLAAYQRQLALAKMAGAQAFMQPQGQRIGAPGQGIYDGGYGGIASTQPPMYF 406


>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 47/71 (66%), Gaps = 10/71 (14%)
 Frame = +1

Query: 1   HMPGFSAADLVAYERQLALSKMAGAQALMHPQGQR----------IGTANQAIYDGGYAG 150
           HMPG SAAD  AYERQ+ALSKM GAQ LMHPQ Q            G ++QAIYDGG+  
Sbjct: 359 HMPGISAADFAAYERQMALSKMGGAQGLMHPQAQHALKQTAMGMGAGGSSQAIYDGGFQN 418

Query: 151 IATTQPPMYYQ 183
            ATTQ  MYYQ
Sbjct: 419 AATTQQLMYYQ 429


>ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
          Length = 426

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/71 (60%), Positives = 47/71 (66%), Gaps = 10/71 (14%)
 Frame = +1

Query: 1   HMPGFSAADLVAYERQLALSKMAGAQALMHPQGQR----------IGTANQAIYDGGYAG 150
           HMPG SAAD  AYERQ+ALSKM GAQ LMHPQ Q            G ++QAIYDGG+  
Sbjct: 356 HMPGISAADFAAYERQMALSKMGGAQGLMHPQAQHALKQTAMGMGAGGSSQAIYDGGFQN 415

Query: 151 IATTQPPMYYQ 183
            ATTQ  MYYQ
Sbjct: 416 AATTQQLMYYQ 426


>gb|AFK42319.1| unknown [Lotus japonicus]
          Length = 103

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
 Frame = +1

Query: 4   MPGFSAADLVAYERQLALSKMAGAQALMHPQGQR------IGTANQAIYDGGYAGIATTQ 165
           +PGFSA DL+AYERQLA+SKM G  ALMHPQGQ       IG A+QAIYDGG+  +A  Q
Sbjct: 39  LPGFSATDLLAYERQLAMSKMGGVHALMHPQGQHPLKQAAIG-ASQAIYDGGFQNVAAAQ 97

Query: 166 PPMYYQ 183
             MYYQ
Sbjct: 98  QMMYYQ 103


>ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 422

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 7/67 (10%)
 Frame = +1

Query: 4   MPGFSAADLVAYERQLALSKMAGAQALMHPQGQR-------IGTANQAIYDGGYAGIATT 162
           +PG SA DL+AYERQLA+SKM G  ALMHPQGQ        IG A+QAIYDGG+  +A  
Sbjct: 357 LPGLSATDLLAYERQLAISKMGGVHALMHPQGQHHLKQAAAIG-ASQAIYDGGFQNVAAA 415

Query: 163 QPPMYYQ 183
           Q  MYYQ
Sbjct: 416 QQMMYYQ 422


Top