BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014256
         (2043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   137   7e-49
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   137   4e-43
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             142   1e-39
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              142   1e-39
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   123   2e-39

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  137 bits (345), Expect(3) = 7e-49
 Identities = 94/323 (29%), Positives = 170/323 (52%), Gaps = 6/323 (1%)
 Frame = +2

Query: 1013 RNQQWEELKRRKQHWGQKWFLGGDFNDILEEIKTSGGSKRQDYSYKKFRNFDHDMGMKDL 1192
            R + WE L R        W L GDFN++++  +  GG  R++ S  +FR   +  G+ ++
Sbjct: 113  RGELWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEV 172

Query: 1193 GFTVRKWTWGNNRDSEGFMKERLDRFFGSLELILQNPKAEVSHILQQASDHSLLILDTKL 1372
              +  +++W  NR+ E  ++ RLDR   +   +   P+A+ +++ +  SDHS LI +   
Sbjct: 173  NHSGYQFSWYGNRNDE-LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVG 231

Query: 1373 DNQKFKPRFYFDQRRTKQEGFENVIKSAWSQTQHGSQIFQVLNKIRNCWIEILKWTKTVH 1552
            DN +    F +D+R  ++EGF++++ + WSQ    +    ++ KI +C  EI KW +   
Sbjct: 232  DNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNAL-MMEKIASCRREISKWKRVSK 290

Query: 1553 TNSAKQIQKIKAQMDSMHEQGGSLNWQLWNNLKKELNTACAQEALYWKQKSK----NNGS 1720
             +SA +IQ+++ ++D+  +Q      +L   LKKEL+     E  +W++KS+     NG 
Sbjct: 291  PSSAVRIQELQFKLDAATKQIPFDRREL-ARLKKELSQEYNNEEQFWQEKSRIMWMRNGD 349

Query: 1721 KKETKTQFFHATTTQRRRGNRIDSL-ERSGDLCQTEEKMYKEMESHFGNLFTTCPTNFG- 1894
            +    T++FHA T  RR  NRI  L +  G    ++E + +  E++F  LF +    +  
Sbjct: 350  R---NTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTV 406

Query: 1895 EILSEVPRTISPSMSRKLIRPVT 1963
            E L  +   +S  M+  L+ P+T
Sbjct: 407  EELENLTPLVSDQMNNNLLAPIT 429



 Score = 72.0 bits (175), Expect(3) = 7e-49
 Identities = 32/79 (40%), Positives = 52/79 (65%)
 Frame = +1

Query: 667 MRVCVWNCRGLGGPSTVSQLKESI*HLFPDLVFLCETKQKKVFVQSVCRELSLQDRWLVV 846
           MR+  WNC+G+G   TV  L+E     FP+++FLCETK+++ ++++V   L   D    V
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLH-TV 59

Query: 847 DPIGRSGGILVFWSQNIQI 903
           +PIG+SGG+ + W  ++QI
Sbjct: 60  EPIGKSGGLALMWKDSVQI 78



 Score = 34.3 bits (77), Expect(3) = 7e-49
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 1963 DEIRKAIFFMNPNSTPGPDGMTPLFFQ 2043
            +E+++A F +NP+  PGPDGM    +Q
Sbjct: 431  EEVQRATFSINPHKCPGPDGMNGFLYQ 457


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  137 bits (345), Expect(2) = 4e-43
 Identities = 95/322 (29%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
 Frame = +2

Query: 1007 SIRNQQWEELKRRKQHWGQKWFLGGDFNDILEEIKTSGGSKRQDYSYKKFRNFDHDMGMK 1186
            S R+  WE+L+R   H    W + GDFN+IL   +  GG +R   S + F N  +   MK
Sbjct: 473  SERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMK 532

Query: 1187 DLGFTVRKWTWGNNRDSEGFMKERLDRFFGSLELILQNPKAEVSHILQQASDHSLLILDT 1366
            DL      ++W   R +E  ++  LDR F + +     P  E   +    SDH+ +I+D 
Sbjct: 533  DLKSKGNPYSWVGKRQNE-TIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDI 591

Query: 1367 KLDNQKFKPRFYFDQRRTKQEGFENVIKSAWSQTQHGSQIFQVLNKIRNCWIEILKWTKT 1546
              +    + +F +D+R  + E F + ++  W++ +  S       K+  C  E+ KW + 
Sbjct: 592  AEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSH-GGYYEKLHCCRQELAKWKRR 650

Query: 1547 VHTNSAKQIQKIKAQMDSMHEQGGSLNWQLWNNLKKELNTACAQEALYWKQKSKNNGS-K 1723
              TN+A++I+ +K ++D+  E+  +L  Q    L+++LN A   E LYW  KS+N     
Sbjct: 651  TKTNTAEKIETLKYRVDAA-ERDHTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLL 709

Query: 1724 KETKTQFFHATTTQRRRGNRIDSL-ERSGDLCQTEEKMYKEMESHFGNLFTTCPT-NFGE 1897
             +  T FF+A+T  R+  NRI ++ +  G     ++ + K  E++F +LFTT  T ++ E
Sbjct: 710  GDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTSDWEE 769

Query: 1898 ILSEVPRTISPSMSRKLIRPVT 1963
            I+S +   ++  M+ +L++ VT
Sbjct: 770  IISGIAPKVTEQMNHELLQSVT 791



 Score = 66.2 bits (160), Expect(2) = 4e-43
 Identities = 35/95 (36%), Positives = 58/95 (61%)
 Frame = +1

Query: 631 GGSQPQLAPKLSMRVCVWNCRGLGGPSTVSQLKESI*HLFPDLVFLCETKQKKVFVQSVC 810
           GG+    +P   MRV  WNC+GLG P TV +L+E     F D++FL ETKQ+  + + + 
Sbjct: 354 GGAGTTTSP---MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLG 410

Query: 811 RELSLQDRWLVVDPIGRSGGILVFWSQNIQILKVS 915
            ++  +D   ++ P G SGG++V+W +++ I  +S
Sbjct: 411 VKMGFED-MCIISPRGLSGGLVVYWKKHLSIQVIS 444


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  142 bits (358), Expect(3) = 1e-39
 Identities = 97/332 (29%), Positives = 165/332 (49%), Gaps = 6/332 (1%)
 Frame = +2

Query: 1001 DDSIRNQQWEELKRRKQHWGQKWFLGGDFNDILEEIKTSGGSKRQDYSYKKFRNFDHDMG 1180
            D S R+Q WE + R       KW + GDFNDIL   + +GG +R D   K F        
Sbjct: 72   DRSKRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCD 131

Query: 1181 MKDLGFTVRKWTWGNNRDSEGFMKERLDRFFGSLELILQNPKAEVSHILQQASDHSLLIL 1360
            + ++      +TW   R  + +++ RLDR FG+ E     P +  + +  + SDH  +++
Sbjct: 132  LVEMPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLI 190

Query: 1361 DTKLDNQKFKPRFYFDQRRTKQEGFENVIKSAWSQTQHGSQIFQVLNKIRNCWIEILKWT 1540
                    ++ +F FD+R   +E  +  I   WS+ +HG+ I  V +++R C   +  W 
Sbjct: 191  KLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWK 249

Query: 1541 KTVHTNSAKQIQKIKAQMDSMHEQGGSLNWQLWNN---LKKELNTACAQEALYWKQKSKN 1711
            K  + NS  +I +++A +    E+  SL W ++     LKK+L  A  +E  YWKQKS+ 
Sbjct: 250  KQNNLNSLDKINQLEAAL----EKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQ 305

Query: 1712 NGSKKETK-TQFFHATTTQRRRGNRIDSLERSGDLCQTEEKMYKEM-ESHFGNLF-TTCP 1882
               +   + +++FHA   Q R+  RI+ L+      QT E    E+  ++FGNLF ++ P
Sbjct: 306  KWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNP 365

Query: 1883 TNFGEILSEVPRTISPSMSRKLIRPVTTKSEK 1978
            + F +  S +   +S  M+  L+  V+ +  K
Sbjct: 366  SGFTDWFSGLVPRVSEVMNESLVGEVSAQEIK 397



 Score = 39.7 bits (91), Expect(3) = 1e-39
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +1

Query: 1966 EIRKAIFFMNPNSTPGPDGMTPLFFQ 2043
            EI++A+F + P S PGPDGM+ LFFQ
Sbjct: 395  EIKEAVFSIKPASAPGPDGMSALFFQ 420



 Score = 30.4 bits (67), Expect(3) = 1e-39
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 829 DRWLVVDPIGRSGGILVFWSQNIQI-LK-VSKSQFCVEVEF 945
           D+   V+P+G+ GG+ + W  ++Q+ LK V K+    +V+F
Sbjct: 17  DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQF 57


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  142 bits (358), Expect(3) = 1e-39
 Identities = 97/332 (29%), Positives = 165/332 (49%), Gaps = 6/332 (1%)
 Frame = +2

Query: 1001 DDSIRNQQWEELKRRKQHWGQKWFLGGDFNDILEEIKTSGGSKRQDYSYKKFRNFDHDMG 1180
            D S R+Q WE + R       KW + GDFNDIL   + +GG +R D   K F        
Sbjct: 75   DRSKRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCD 134

Query: 1181 MKDLGFTVRKWTWGNNRDSEGFMKERLDRFFGSLELILQNPKAEVSHILQQASDHSLLIL 1360
            + ++      +TW   R  + +++ RLDR FG+ E     P +  + +  + SDH  +++
Sbjct: 135  LVEMPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLI 193

Query: 1361 DTKLDNQKFKPRFYFDQRRTKQEGFENVIKSAWSQTQHGSQIFQVLNKIRNCWIEILKWT 1540
                    ++ +F FD+R   +E  +  I   WS+ +HG+ I  V +++R C   +  W 
Sbjct: 194  KLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWK 252

Query: 1541 KTVHTNSAKQIQKIKAQMDSMHEQGGSLNWQLWNN---LKKELNTACAQEALYWKQKSKN 1711
            K  + NS  +I +++A +    E+  SL W ++     LKK+L  A  +E  YWKQKS+ 
Sbjct: 253  KQNNLNSLDKINQLEAAL----EKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQ 308

Query: 1712 NGSKKETK-TQFFHATTTQRRRGNRIDSLERSGDLCQTEEKMYKEM-ESHFGNLF-TTCP 1882
               +   + +++FHA   Q R+  RI+ L+      QT E    E+  ++FGNLF ++ P
Sbjct: 309  KWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNP 368

Query: 1883 TNFGEILSEVPRTISPSMSRKLIRPVTTKSEK 1978
            + F +  S +   +S  M+  L+  V+ +  K
Sbjct: 369  SGFTDWFSGLVPRVSEVMNESLVGEVSAQEIK 400



 Score = 39.7 bits (91), Expect(3) = 1e-39
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +1

Query: 1966 EIRKAIFFMNPNSTPGPDGMTPLFFQ 2043
            EI++A+F + P S PGPDGM+ LFFQ
Sbjct: 398  EIKEAVFSIKPASAPGPDGMSALFFQ 423



 Score = 30.4 bits (67), Expect(3) = 1e-39
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 829 DRWLVVDPIGRSGGILVFWSQNIQI-LK-VSKSQFCVEVEF 945
           D+   V+P+G+ GG+ + W  ++Q+ LK V K+    +V+F
Sbjct: 20  DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQF 60


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  123 bits (308), Expect(3) = 2e-39
 Identities = 88/338 (26%), Positives = 166/338 (49%), Gaps = 10/338 (2%)
 Frame = +2

Query: 1001 DDSIRNQQWEELKRRKQHWGQKWFLGGDFNDILEEIKTSGGSKRQDYSYKKFRNFDHDMG 1180
            ++  +++ W  +K     +      GGDFN+IL   +  GG+ R+  +   FRN   D  
Sbjct: 111  EEENKHKTWALIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCS 170

Query: 1181 MKDLGFTVRKWTWGNNRDSEGFMKERLDRFFGSLELILQNPKAEVSHILQQASDHSLLIL 1360
            + DL F  +  TW   R  E  ++ERLDRF  S   +   P+A + H ++  SDH+ ++L
Sbjct: 171  LGDLRFVGQWHTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVL 230

Query: 1361 DTKLDNQKFKPR----FYFDQRRTKQEGFENVIKSAWSQTQHGSQIFQVLNKIRNCWIEI 1528
               L N+    R    F+F+      +  E V++ AW+  + G    ++  K+     E+
Sbjct: 231  RC-LGNEGMPRRRAGGFWFETFWLLDDTCEEVVRGAWNAAEGG----RICEKLGAVAREL 285

Query: 1529 LKWTKTVHTNSAKQIQKIKAQMDSMHEQGGSL-NWQLWNNLKKELNTACAQEALYWKQKS 1705
              W+K    +  K+I+ ++ ++ +   +  S+ +W+    L++EL+   A+   YW  +S
Sbjct: 286  QGWSKKTFGSLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRS 345

Query: 1706 KNNGSKK-ETKTQFFHATTTQRRRGNRIDSLERSGDLCQTE-EKMYKEMESHFGNLFTT- 1876
            +    K  +  T +FH   +QR++ N I  +   G   QTE E++   +E +F  +FT+ 
Sbjct: 346  RVAEVKDGDRNTSYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSS 405

Query: 1877 --CPTNFGEILSEVPRTISPSMSRKLIRPVTTKSEKLF 1984
                 +F E+L  V R+++   +  L++P +   E++F
Sbjct: 406  EPSSNDFQEVLQHVKRSVTQEYNDILLKPYS--KEEIF 441



 Score = 58.2 bits (139), Expect(3) = 2e-39
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = +1

Query: 667 MRVCVWNCRGLGGPSTVSQLKESI*HLFPDLVFLCETKQKKVFVQSVCRELSLQDRWLVV 846
           M++  WNC+G+G P TV QL+  +    PD +F+ ETK  K  V+     L     +  V
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAF-GV 59

Query: 847 DPIGRSGGILVFWSQ---NIQILKVSKSQFCVEV 939
             +GR+GG+ +FW +   + +++  S++  C +V
Sbjct: 60  SCVGRAGGLCMFWKEETISFRMVSFSQNHICGDV 93



 Score = 30.8 bits (68), Expect(3) = 2e-39
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 1963 DEIRKAIFFMNPNSTPGPDGMTPLFFQ 2043
            +EI  A+  M+P   PGPDGM  +F+Q
Sbjct: 438  EEIFAALSDMHPCKAPGPDGMHAIFYQ 464