BLASTX nr result

ID: Cephaelis21_contig00014216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014216
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]    70   6e-13
ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi...    70   6e-13
ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-08
emb|CBI16683.3| unnamed protein product [Vitis vinifera]               60   3e-08
ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
          Length = 736

 Score = 70.5 bits (171), Expect(2) = 6e-13
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +1

Query: 1   GSRGWRPQTENVSSILKLCEKEDDMASKEALMGILRQVGCLDDETYMS 144
           GS GW+P+  NVS+ L LCE+E D A+KEALMG+LRQ+GCL+DE Y S
Sbjct: 643 GSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYAS 690



 Score = 28.1 bits (61), Expect(2) = 6e-13
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 8/33 (24%)
 Frame = +3

Query: 168 GVEKTLERDRTG--------DDDGSEVLFNQLQ 242
           G E + E+DRTG        +DDG+E+L NQ Q
Sbjct: 701 GNELSNEKDRTGADKDIDEDEDDGAEMLLNQFQ 733


>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
           [Vitis vinifera]
          Length = 527

 Score = 70.5 bits (171), Expect(2) = 6e-13
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +1

Query: 1   GSRGWRPQTENVSSILKLCEKEDDMASKEALMGILRQVGCLDDETYMS 144
           GS GW+P+  NVS+ L LCE+E D A+KEALMG+LRQ+GCL+DE Y S
Sbjct: 434 GSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYAS 481



 Score = 28.1 bits (61), Expect(2) = 6e-13
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 8/33 (24%)
 Frame = +3

Query: 168 GVEKTLERDRTG--------DDDGSEVLFNQLQ 242
           G E + E+DRTG        +DDG+E+L NQ Q
Sbjct: 492 GNELSNEKDRTGADKDIDEDEDDGAEMLLNQFQ 524


>ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score = 60.5 bits (145), Expect(2) = 1e-08
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +1

Query: 1   GSRGWRPQTENVSSILKLCEKEDDMASKEALMGILRQVGCLDDETYMS 144
           GS+ W+P   NV+S  KLCE+E DMA+KEAL G LRQ G L D+ Y S
Sbjct: 448 GSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLKDKAYAS 495



 Score = 23.5 bits (49), Expect(2) = 1e-08
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 165 NGVEKTLERDRTGDDDGSEVLFNQLQES 248
           +G    ++ +   +DDG+E+L + LQ S
Sbjct: 511 DGTGDQIDNEEDDEDDGAEMLVSHLQGS 538


>emb|CBI16683.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +1

Query: 1   GSRGWRPQTENVSSILKLCEKEDDMASKEALMGILRQVGCLDDETYM 141
           GS GW+P+  NVS+ L LCE+E D A+KEALMG+LRQ+G  DD   M
Sbjct: 368 GSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEM 414



 Score = 22.7 bits (47), Expect(2) = 3e-08
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 204 DDDGSEVLFNQLQ 242
           +DDG+E+L NQ Q
Sbjct: 408 EDDGAEMLLNQFQ 420


>ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = +1

Query: 1   GSRGWRPQTENVSSILKLCEKEDDMASKEALMGILRQVGCLDDETY 138
           GS+ W+P   NVSS  KLCE+E DMASKEAL   LRQ G L D+ Y
Sbjct: 448 GSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHLKDKAY 493


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