BLASTX nr result

ID: Cephaelis21_contig00014205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014205
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata sub...    56   3e-06
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    56   3e-06

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = -1

Query: 204 WTVSNAVSSVTIVAPSLVKLKLKCVRPRALVIETPSMTDLYL 79
           WTVSNA +S++I AP+L+KL+L C+ PR+L++ETP ++D YL
Sbjct: 234 WTVSNAPNSLSIFAPNLLKLELNCIEPRSLILETPLLSDFYL 275


>ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313245|gb|EFH43668.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 204 WTVSNAVSSVTIVAPSLVKLKLKCVRPRALVIETPSMTDLYLLPF*IRSFKNNDWGIFKP 25
           WTVSNA  S+ IVAP+L++LKLKC +P++L++ETP +   +   F +   +   +G F+ 
Sbjct: 225 WTVSNAPLSLAIVAPNLLELKLKCNKPKSLILETPKLVKFH---FSVEDAEGVGFGEFRD 281

Query: 24  ISSL 13
           ++SL
Sbjct: 282 LNSL 285


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = -1

Query: 204 WTVSNAVSSVTIVAPSLVKLKLKCVRPRALVIETPSMTDLY 82
           WTVSNA  S+ I APSL KL+LKCV+P+ L+IETP ++D +
Sbjct: 229 WTVSNAPVSLCIYAPSLSKLELKCVKPKFLIIETPMLSDFH 269


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