BLASTX nr result

ID: Cephaelis21_contig00014167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014167
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]    181   4e-43
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...   181   5e-43
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...   181   5e-43
ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arab...   179   2e-42
ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a...   178   3e-42

>dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score =  181 bits (459), Expect = 4e-43
 Identities = 94/144 (65%), Positives = 102/144 (70%)
 Frame = -2

Query: 1158 LQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTKEEREDRRTL 979
            LQ++NYRMRV IQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP+K SKT  ERE+RRTL
Sbjct: 10   LQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTTGEREERRTL 69

Query: 978  GLVLLRGEEVISMTVEGPPPPDESRVKXXXXXXXXXXXXXXXXXXXXXPTGPLVQAQXXX 799
            GL+LLRGEEV+SMTVEGPPPPDESR K                      TGPL+QAQ   
Sbjct: 70   GLLLLRGEEVVSMTVEGPPPPDESRAKASAGGGALSGTGVGRAAGRGVATGPLLQAQPGL 129

Query: 798  XXXXXXXXXXXXGMMQPQISRPPV 727
                        GMMQPQISRPP+
Sbjct: 130  SGPVRGVGGPAPGMMQPQISRPPM 153


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|30685110|ref|NP_849414.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
            protein [Arabidopsis thaliana] gi|7268840|emb|CAB79044.1|
            putative snRNP protein [Arabidopsis thaliana]
            gi|28393634|gb|AAO42236.1| putative snRNP protein
            [Arabidopsis thaliana] gi|28827492|gb|AAO50590.1|
            putative snRNP protein [Arabidopsis thaliana]
            gi|222423490|dbj|BAH19715.1| AT4G20440 [Arabidopsis
            thaliana] gi|332658930|gb|AEE84330.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658931|gb|AEE84331.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658932|gb|AEE84332.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana] gi|332658933|gb|AEE84333.1| small nuclear
            ribonucleoprotein associated protein B [Arabidopsis
            thaliana]
          Length = 257

 Score =  181 bits (458), Expect = 5e-43
 Identities = 99/143 (69%), Positives = 101/143 (70%)
 Frame = -2

Query: 1158 LQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTKEEREDRRTL 979
            LQ+INYRMRV IQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10   LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 978  GLVLLRGEEVISMTVEGPPPPDESRVKXXXXXXXXXXXXXXXXXXXXXPTGPLVQAQXXX 799
            GLVLLRGEEVISMTVEGPPPP+ESR K                     PTGPLVQAQ   
Sbjct: 70   GLVLLRGEEVISMTVEGPPPPEESRAK-AGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGL 128

Query: 798  XXXXXXXXXXXXGMMQPQISRPP 730
                        GMMQPQISRPP
Sbjct: 129  SGPVRGVGGPAPGMMQPQISRPP 151


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
            lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
            ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  181 bits (458), Expect = 5e-43
 Identities = 99/143 (69%), Positives = 101/143 (70%)
 Frame = -2

Query: 1158 LQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTKEEREDRRTL 979
            LQ+INYRMRV IQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10   LQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTL 69

Query: 978  GLVLLRGEEVISMTVEGPPPPDESRVKXXXXXXXXXXXXXXXXXXXXXPTGPLVQAQXXX 799
            GLVLLRGEEVISMTVEGPPPP+ESR K                     PTGPLVQAQ   
Sbjct: 70   GLVLLRGEEVISMTVEGPPPPEESRAK-AGSAAAVAGPGIGRAAGRGVPTGPLVQAQPGL 128

Query: 798  XXXXXXXXXXXXGMMQPQISRPP 730
                        GMMQPQISRPP
Sbjct: 129  SGPVRGVGGPAPGMMQPQISRPP 151


>ref|XP_002865361.1| hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
            lyrata] gi|297311196|gb|EFH41620.1| hypothetical protein
            ARALYDRAFT_494537 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  179 bits (453), Expect = 2e-42
 Identities = 99/144 (68%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = -2

Query: 1158 LQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGS-KTKEEREDRRT 982
            LQ+INYRMRV IQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KGS KTKE+RE+RRT
Sbjct: 10   LQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGSKKTKEDREERRT 69

Query: 981  LGLVLLRGEEVISMTVEGPPPPDESRVKXXXXXXXXXXXXXXXXXXXXXPTGPLVQAQXX 802
            LGLVLLRGEEVISMTVEGPPPP+ESR K                     PTGPLVQAQ  
Sbjct: 70   LGLVLLRGEEVISMTVEGPPPPEESRAK-SGSVTAVAGPGIGRAAGRGVPTGPLVQAQPG 128

Query: 801  XXXXXXXXXXXXXGMMQPQISRPP 730
                         GMMQPQISRPP
Sbjct: 129  LSGPVRGIGGPAPGMMQPQISRPP 152


>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Cucumis sativus] gi|449490639|ref|XP_004158663.1|
            PREDICTED: small nuclear ribonucleoprotein-associated
            protein B'-like [Cucumis sativus]
          Length = 284

 Score =  178 bits (451), Expect = 3e-42
 Identities = 98/144 (68%), Positives = 101/144 (70%)
 Frame = -2

Query: 1158 LQYINYRMRVHIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKTKEEREDRRTL 979
            LQYINYRMRV IQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KG KT EER++RRTL
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTL 69

Query: 978  GLVLLRGEEVISMTVEGPPPPDESRVKXXXXXXXXXXXXXXXXXXXXXPTGPLVQAQXXX 799
            GLVLLRGEEVISMTVEGPPP +ESR K                     PT PLVQAQ   
Sbjct: 70   GLVLLRGEEVISMTVEGPPPAEESRAK-AVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGL 128

Query: 798  XXXXXXXXXXXXGMMQPQISRPPV 727
                        GMMQPQISRPPV
Sbjct: 129  AGPVRGVGGPAPGMMQPQISRPPV 152