BLASTX nr result

ID: Cephaelis21_contig00014055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014055
         (1525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515364.1| arginine/serine-rich splicing factor, putati...   177   5e-42
gb|AFK40774.1| unknown [Lotus japonicus]                              177   7e-42
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   176   2e-41
ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac...   173   9e-41

>ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223545308|gb|EEF46813.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 179

 Score =  177 bits (450), Expect = 5e-42
 Identities = 105/213 (49%), Positives = 118/213 (55%), Gaps = 11/213 (5%)
 Frame = +3

Query: 144 MSRVYVGNLDERVTERDLEDEFRFYGVLRSVWVARRPPGYAFVEFDDLRDAEDAIRQLDG 323
           MSRVYVGNLD RVTERDLEDEFR +GV+RSVWVARRPPGYAF++FDD RDA+DAI +LDG
Sbjct: 1   MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDG 60

Query: 324 KNGWRVELSHNSKXXXXXXXXXXXXXXDDLKCYECGEPGHFARECXXXXXXXXXXXXXXX 503
           KNGWRVELSHNS+               DLKCYECGEPGHFAREC               
Sbjct: 61  KNGWRVELSHNSRGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRVG---------- 110

Query: 504 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGRTSSRSPDYQR----GHR------Q 653
                                             GR  SRSP Y+R    G R      +
Sbjct: 111 ---------------------------------SGRRRSRSPRYRRSPSYGRRSYSPRGR 137

Query: 654 SPYAKGTSPHG-NYSRSPTHRRGHREPLCANGD 749
           SP  +  SP G +YSRSP + RG  E   ANG+
Sbjct: 138 SPKRRSISPRGRSYSRSPPY-RGREELPYANGN 169


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  177 bits (449), Expect = 7e-42
 Identities = 96/180 (53%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
 Frame = +3

Query: 144 MSRVYVGNLDERVTERDLEDEFRFYGVLRSVWVARRPPGYAFVEFDDLRDAEDAIRQLDG 323
           MSRVYVGNLD RV+ERDLEDEFR YGVLRSVWVARRPPGYAF+EFDD RDA DAI  LDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 324 KNGWRVELSHNSKXXXXXXXXXXXXXXDDLKCYECGEPGHFAREC----XXXXXXXXXXX 491
           KNGWRVELSHNSK              +DLKCYECGEPGHFAREC               
Sbjct: 61  KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFARECRSRGGSRGLGSGRRR 120

Query: 492 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGRTSSRSPDYQRGHRQSPYAKG 671
                                                RGR++SRSP Y+   R SPYA G
Sbjct: 121 SPSPYRRRRSPSYGYGRRSYSPRGRRSPRPRSITPPLRGRSNSRSPPYRHARRVSPYANG 180


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  176 bits (446), Expect = 1e-41
 Identities = 98/179 (54%), Positives = 103/179 (57%), Gaps = 3/179 (1%)
 Frame = +3

Query: 144 MSRVYVGNLDERVTERDLEDEFRFYGVLRSVWVARRPPGYAFVEFDDLRDAEDAIRQLDG 323
           MSRVYVGNLD RV+ERDLEDEFR YGVLRSVWVARRPPGYAFVEFDD RDA DAIR LDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 324 KNGWRVELSHNSK-XXXXXXXXXXXXXXDDLKCYECGEPGHFAREC--XXXXXXXXXXXX 494
           KNGWRVELSHNSK               +D KCYECGEPGHFAREC              
Sbjct: 61  KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFARECRLRIGSRGLGSSRR 120

Query: 495 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGRTSSRSPDYQRGHRQSPYAKG 671
                                              +RGR+ SRSP Y+ G R SPYA G
Sbjct: 121 RSPSPRRRGSPSYGYGRRSYSPRERRSPRRRSLSPRRGRSYSRSPPYRHGRRDSPYAIG 179


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  176 bits (445), Expect = 2e-41
 Identities = 107/220 (48%), Positives = 117/220 (53%), Gaps = 18/220 (8%)
 Frame = +3

Query: 144 MSRVYVGNLDERVTERDLEDEFRFYGVLRSVWVARRPPGYAFVEFDDLRDAEDAIRQLDG 323
           M+RVYVGNLD RV+ERDLEDEFR YGVLRSVWVARRPPGYAFVEFDD RDA DAIR LDG
Sbjct: 1   MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 324 KNGWRVELSHNSK----XXXXXXXXXXXXXXDDLKCYECGEPGHFARECXXXXXXXXXXX 491
           KNGWRVELSHNSK                  +D+KCYECGEPGHFAREC           
Sbjct: 61  KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFARECRLRIGSRGLGS 120

Query: 492 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGRTSS----RSPDY-------- 635
                                                R R+ S    RSP Y        
Sbjct: 121 G------------------------------------RRRSPSPKRRRSPSYGYGRRSYS 144

Query: 636 QRGHRQSPYAKGTSPH--GNYSRSPTHRRGHREPLCANGD 749
            RG R+SP  +  SP    +YSRSP +R   R+   ANGD
Sbjct: 145 PRGGRRSPRRRSVSPRRGRSYSRSPPYRHARRDSPYANGD 184


>ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
           [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score =  173 bits (439), Expect = 9e-41
 Identities = 105/215 (48%), Positives = 119/215 (55%), Gaps = 13/215 (6%)
 Frame = +3

Query: 144 MSRVYVGNLDERVTERDLEDEFRFYGVLRSVWVARRPPGYAFVEFDDLRDAEDAIRQLDG 323
           MSRVYVGNLD RVTER+LEDEFR +GV+RSVWVARRPPGYAF++FDD RDA+DAIR+LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 324 KNGWRVELSHNSK--XXXXXXXXXXXXXXDDLKCYECGEPGHFARECXXXXXXXXXXXXX 497
           KNGWRVELSHNS+                 DLKCYECGEPGHFAREC             
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRGG-------- 112

Query: 498 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGRTSSRSPDYQR----GHR----- 650
                                               GR  SRSP Y+R    G R     
Sbjct: 113 -----------------------------------SGRRRSRSPRYRRSPSYGRRSYSPR 137

Query: 651 -QSPYAKGTSPHG-NYSRSPTHRRGHREPLCANGD 749
            +SP  +  SP G +YSRSP + RG  E   ANG+
Sbjct: 138 GRSPRRRSLSPRGRSYSRSPGY-RGREELPYANGN 171


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