BLASTX nr result

ID: Cephaelis21_contig00014048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014048
         (2081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]      334   6e-89
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   323   8e-86
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   323   8e-86
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   322   2e-85
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   317   1e-83

>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score =  334 bits (856), Expect = 6e-89
 Identities = 161/180 (89%), Positives = 170/180 (94%)
 Frame = -2

Query: 1594 SNGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            +N ENRTIWVGDL NWMDEDYLR+CFAST EVASIKVIRNKQTGFSEGYGFVEFF+HAAA
Sbjct: 112  NNNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAA 171

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWATFSTGDKRSNNGSDLSIFVGDLAADVTDSLLLETFA 1235
            EKVLQ YSC+ MPN DQPFRLNWATFS GDKR+NNGSDLSIFVGDLAADVTD+LL ETFA
Sbjct: 172  EKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFA 231

Query: 1234 SRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRAMRIGAATPRK 1055
            ++YPSVKAAKVV DANTGRSKGYGFVRFGDDNERSQAMT+MNGVYCSSR MRIGAATPRK
Sbjct: 232  TKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRK 291


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  323 bits (829), Expect = 8e-86
 Identities = 155/180 (86%), Positives = 169/180 (93%)
 Frame = -2

Query: 1594 SNGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            SN +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWATFSTGDKRSNNGSDLSIFVGDLAADVTDSLLLETFA 1235
            EKVLQ Y+ ++MPNTDQPFRLNWATFS GDKRS+NG DLSIFVGDLA+DV+DSLL ETFA
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFA 198

Query: 1234 SRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRAMRIGAATPRK 1055
             +YPSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMT+MNGVYCSSR MRIGAATPRK
Sbjct: 199  GKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK 258



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
 Frame = -2

Query: 1591 NGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            NG + +I+VGDL + + +  L   FA     V + KV+ +  TG S+GYGFV F      
Sbjct: 173  NGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENER 232

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWAT----------FSTGDKRSNNGSDLSIFVGDLAADV 1265
             + +   + +    + +P R+  AT          +S+  +   +  + +IFVG L  +V
Sbjct: 233  SQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNV 290

Query: 1264 TDSLLLETFASRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRA 1085
            +D  L + F S+Y  + + K+ +       KG GFV+F + N    A+  +NG     + 
Sbjct: 291  SDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQT 343

Query: 1084 MRI 1076
            +R+
Sbjct: 344  VRL 346


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  323 bits (829), Expect = 8e-86
 Identities = 155/180 (86%), Positives = 169/180 (93%)
 Frame = -2

Query: 1594 SNGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            SN +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWATFSTGDKRSNNGSDLSIFVGDLAADVTDSLLLETFA 1235
            EKVLQ Y+ ++MPNTDQPFRLNWATFS GDKRS+NG DLSIFVGDLA+DV+DSLL ETFA
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFA 198

Query: 1234 SRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRAMRIGAATPRK 1055
             +YPSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMT+MNGVYCSSR MRIGAATPRK
Sbjct: 199  GKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK 258



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
 Frame = -2

Query: 1591 NGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            NG + +I+VGDL + + +  L   FA     V + KV+ +  TG S+GYGFV F      
Sbjct: 173  NGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENER 232

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWAT----------FSTGDKRSNNGSDL---------SI 1292
             + +   + +    + +P R+  AT          +S+    ++NG+ +         +I
Sbjct: 233  SQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTI 290

Query: 1291 FVGDLAADVTDSLLLETFASRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDM 1112
            FVG L  +V+D  L + F S+Y  + + K+ +       KG GFV+F + N    A+  +
Sbjct: 291  FVGGLDPNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKL 343

Query: 1111 NGVYCSSRAMRI 1076
            NG     + +R+
Sbjct: 344  NGTVIGKQTVRL 355


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  322 bits (825), Expect = 2e-85
 Identities = 153/178 (85%), Positives = 167/178 (93%)
 Frame = -2

Query: 1588 GENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEK 1409
            GENRT+W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG SEGYGFVEF++HA AEK
Sbjct: 106  GENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEK 165

Query: 1408 VLQAYSCIVMPNTDQPFRLNWATFSTGDKRSNNGSDLSIFVGDLAADVTDSLLLETFASR 1229
            VLQ Y+ I+MPNT+QPFRLNWATFSTGDKRS+N  DLSIFVGDLAADVTDSLL ETF SR
Sbjct: 166  VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSR 225

Query: 1228 YPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRAMRIGAATPRK 1055
            YPSVKAAKVV DANTGRSKGYGFVRFGDDNER+QAMT+MNGVYCSSRAMRIGAATPRK
Sbjct: 226  YPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRK 283


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  317 bits (811), Expect = 1e-83
 Identities = 151/179 (84%), Positives = 165/179 (92%)
 Frame = -2

Query: 1591 NGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAE 1412
            +GEN+TIW+GDLH+WMDE+YL SCF STGE+ASIKVIRNKQTG SEGYGFVEF +HA AE
Sbjct: 89   SGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAE 148

Query: 1411 KVLQAYSCIVMPNTDQPFRLNWATFSTGDKRSNNGSDLSIFVGDLAADVTDSLLLETFAS 1232
            KVLQ Y  I+MPNT+QPFRLNWATFSTGDKRS+N  DLSIFVGDLAADVTDSLL ETF S
Sbjct: 149  KVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVS 208

Query: 1231 RYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMNGVYCSSRAMRIGAATPRK 1055
            +YPSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAMT+MNGVYCSSR MRIGAATPRK
Sbjct: 209  KYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRK 267



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
 Frame = -2

Query: 1591 NGENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFSEGYGFVEFFSHAAA 1415
            N  + +I+VGDL   + +  L+  F S    V + KV+ +  TG S+GYGFV F   +  
Sbjct: 182  NAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSER 241

Query: 1414 EKVLQAYSCIVMPNTDQPFRLNWAT------------------FSTGDKRSNNGSDLSIF 1289
             + +   + +    + +P R+  AT                   + G +   + ++ +IF
Sbjct: 242  TQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIF 299

Query: 1288 VGDLAADVTDSLLLETFASRYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTDMN 1109
            VG L  +VTD  L + F S+Y  + + K+ +       KG GFV+F + +   +A+  +N
Sbjct: 300  VGGLDPNVTDEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFANRDNAEEALQKLN 352

Query: 1108 GVYCSSRAMRI 1076
            G     + +R+
Sbjct: 353  GTVIGKQTVRL 363


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