BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014019
         (1349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...   235   2e-59
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   232   2e-58
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   225   2e-56
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]              223   1e-55
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...   223   1e-55

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score =  235 bits (599), Expect = 2e-59
 Identities = 141/457 (30%), Positives = 229/457 (50%), Gaps = 9/457 (1%)
 Frame = +1

Query: 1    VLQNVYWRVGNGKTINFWSDVWLPEIGPLLPHCLEQDSINIEAKACELVTPYGE---WDW 171
            V + + W +G+GK I FW D WL    PLL      D + +E +   +   + E   WD 
Sbjct: 225  VNRGIGWVLGDGKIIRFWQDRWLLST-PLLEWV--SDQLPVEERGQRVADYWIEGVGWDM 281

Query: 172  NYLESLLEINIVHYIAGISAPSPVDPEDRCAWKLSDNGKISAAKAYKMISEQSWDQPSKE 351
              +   L   +   +  +        ED+ +W  ++NG+ + + AY +   QS D+ SK+
Sbjct: 282  ERIAVFLPEFMRQRLLAVVIGGCYGVEDKMSWVGTENGRFTVSSAYLI---QSVDEISKQ 338

Query: 352  AA-----RIWKLICPQRVKSFLWLASKQKLMTNVNRARRGFTDAADCEQCGHSQESTLHI 516
                   R+W+++ P+R + FLWL   Q ++TN  R RR   D+  C  C  + ES +H+
Sbjct: 339  CMSRFFDRVWRVMVPERARIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHV 398

Query: 517  FRDGPKAQEVWRRVVPRNEFHRFFARPWEEWLHWNLQLDDVVQQTSVQWNTWFAMICWQL 696
             RD P    +W RVVP  E  RFF     EW++ NL+     ++ S  W T FA+  W  
Sbjct: 399  LRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLKERSDSERRS--WPTLFALTVWWG 456

Query: 697  WKNRNEFTFTGESKSGNDVLIVAWTLARHSTEGSRIEVHRLDSSRLQREQMTKWQQPSVG 876
            WK R  + F  +S+  + V  +   +A    E + +  +      +  E+M  W++P+ G
Sbjct: 457  WKWRCGYVFGEDSRCRDRVKFLKSAVAE--VEAAHLAANGDAREDVLVERMIAWRKPAEG 514

Query: 877  WIKLNSDGARDTGTGWASAGGVVRNHLGQWICGYGRAIGFCSDLQAELWACLDGLSLAWE 1056
            W+ +N+DGA     G A+AGGV+R+  G W+ G+   IG CS   AELW    GL +AWE
Sbjct: 515  WVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWE 574

Query: 1057 RGFRNIEVELDNEEAVQLINGDEDDGNQCA-IVRKIRQFRRREWNWQCNHVPRKANKVAD 1233
            RG+R + +E+D+   V  +     D +  A +VR    F  ++W  +  HV R+AN++AD
Sbjct: 575  RGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLAD 634

Query: 1234 AIAKGSRYQDLPFSVMENPPSQVLQLLADDSASIALP 1344
             +A  +      F ++++ P  V  +L +D    + P
Sbjct: 635  GLANYAFTLPFGFLLLDSCPEHVSSILLEDVMGTSFP 671


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  232 bits (591), Expect = 2e-58
 Identities = 151/452 (33%), Positives = 234/452 (51%), Gaps = 12/452 (2%)
 Frame = +1

Query: 1    VLQNVYWRVGNGKTINFWSDVWL-----PEIGP-LLPHCLEQDSINIEAKACELVTPYGE 162
            V++ V W  G+G TI FW D WL      E+G  ++P   E + I +   A +   P   
Sbjct: 784  VVKGVGWVPGDGCTIRFWLDRWLLQEPLVELGTDMIP---EGERIKV---AADYWLPGSG 837

Query: 163  WDWNYLESLLEINIVHYIAGISAPSPVDPEDRCAWKLSDNGKISAAKAYKMISEQSWDQP 342
            W+   L   L   +   +  +     +   D  +WK + +G  +   AY ++     D+P
Sbjct: 838  WNLEILGLYLPETVKRRLLSVVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQGDVGDRP 897

Query: 343  SKEAA--RIWKLICPQRVKSFLWLASKQKLMTNVNRARRGFTDAADCEQCGHSQESTLHI 516
            +  +   RIWKLI P+RV+ F+WL S+  +MTNV R RR  ++ A C  C  ++E+ LH+
Sbjct: 898  NMGSFFNRIWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHV 957

Query: 517  FRDGPKAQEVWRRVVPRNEFHRFFARPWEEWLHWNLQLDDVVQQTSVQWNTWFAMICWQL 696
             RD P  + +WRR++P    H FF++   EWL  N+   D V+     W T F M  W  
Sbjct: 958  LRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNM---DPVKGI---WPTLFGMGIWWA 1011

Query: 697  WKNRNEFTFTGESKSGNDVLIVAWTLARHSTEGSRIEVHRLDS--SRLQREQMTKWQQPS 870
            WK R    F GE K   D L     +A    E  R+ V  + +  + ++ E+M +WQ PS
Sbjct: 1012 WKWRCCDVF-GERKICRDRLKFIKDMAE---EVRRVHVGAVGNRPNGVRVERMIRWQVPS 1067

Query: 871  VGWIKLNSDGARDTGTGWASAGGVVRNHLGQWICGYGRAIGFCSDLQAELWACLDGLSLA 1050
             GW+K+ +DGA     G A+AGG +RN  G+W+ G+   IG C+   AELW    GL +A
Sbjct: 1068 DGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIA 1127

Query: 1051 WERGFRNIEVELDNEEAVQLINGDEDDGNQCA-IVRKIRQFRRREWNWQCNHVPRKANKV 1227
            W++GFR +E++LD +  V  ++    + +  + +VR  + F  R+W  + +HV R+AN++
Sbjct: 1128 WDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRL 1187

Query: 1228 ADAIAKGSRYQDLPFSVMENPPSQV-LQLLAD 1320
            AD +A  +    L     +  P  V L LLAD
Sbjct: 1188 ADGLANYAFTLPLGLHCFDACPEGVRLLLLAD 1219


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score =  225 bits (573), Expect = 2e-56
 Identities = 146/453 (32%), Positives = 221/453 (48%), Gaps = 5/453 (1%)
 Frame = +1

Query: 1    VLQNVYWRVGNGKTINFWSDVWLPEIGPLLPHCLEQDSINIEAKACELVTPYGEWDWNYL 180
            V + V W  G+GKTI+FWSD WL            Q+ ++  AK                
Sbjct: 566  VAKGVRWVPGDGKTISFWSDRWLL-----------QEQLSAVAKE--------------- 599

Query: 181  ESLLEINIVHYIAGISAPSPVDPEDRCAWKLSDNGKISAAKAYKMISEQSWDQP--SKEA 354
                          ISA + +   D  +WK + NG  +   AY+++  ++ ++P      
Sbjct: 600  -------------SISADALLS--DELSWKGTQNGDFTVRSAYELLKPEAEERPLIGSFL 644

Query: 355  ARIWKLICPQRVKSFLWLASKQKLMTNVNRARRGFTDAADCEQCGHSQESTLHIFRDGPK 534
             +IWKL+ P+RV+ F+WL S   +MTNV R RR  +D A C  C  + ES LH+ RD P 
Sbjct: 645  KQIWKLVAPERVRVFIWLVSHMVIMTNVERVRRHLSDIATCSVCNGADESILHVLRDCPA 704

Query: 535  AQEVWRRVVPRNEFHRFFARPWEEWLHWNLQLDDVVQQTSVQWNTWFAMICWQLWKNRNE 714
               +W+R++P+   + FF++   EWL  NL            W T F+M  W  WK R  
Sbjct: 705  MTPIWQRLLPQRRQNEFFSQ--FEWLFTNLD------PAKGDWPTLFSMGIWWAWKWRCG 756

Query: 715  FTFTGESKSGNDVLIVAWTLARHSTEGSRIEVHRLDS--SRLQREQMTKWQQPSVGWIKL 888
              F GE K   D L     +A    E  +  V  L++   R + E+M +W+ PS  W+KL
Sbjct: 757  DVF-GERKLCRDRLKFIKDIAE---EVRKAHVGTLNNHVKRARVERMIRWKAPSDRWVKL 812

Query: 889  NSDGARDTGTGWASAGGVVRNHLGQWICGYGRAIGFCSDLQAELWACLDGLSLAWERGFR 1068
             +DGA     G A+A G + N  G+W+ G+   IG C    AELW    GL +AW++GFR
Sbjct: 813  TTDGASRGHQGLAAASGAILNLQGEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKGFR 872

Query: 1069 NIEVELDNEEAVQLINGDEDDGNQCA-IVRKIRQFRRREWNWQCNHVPRKANKVADAIAK 1245
             +E+ LD+E  V  ++      +  + +VR  + F  R+W  + +HV R+AN++AD +A 
Sbjct: 873  RVELNLDSELVVGFLSTGISKAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLAN 932

Query: 1246 GSRYQDLPFSVMENPPSQVLQLLADDSASIALP 1344
             + +  L F   E  P  VL  L +D+   + P
Sbjct: 933  YAFFLPLGFHCFEICPEDVLLFLVEDANGTSFP 965


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score =  223 bits (567), Expect = 1e-55
 Identities = 146/452 (32%), Positives = 218/452 (48%), Gaps = 4/452 (0%)
 Frame = +1

Query: 1    VLQNVYWRVGNGKTINFWSDVWLPEIGPLLPHCLEQDSINIEAKACELVTPYGEWDWNYL 180
            V   V W  G+G+ I FW+D W+     L     E+ +      A +L  P   WD+  +
Sbjct: 278  VSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKI 337

Query: 181  ESLLEINIVHYIAGISAPSPVDPEDRCAWKLSDNGKISAAKAYKMISEQSWDQPSKEAAR 360
            +     N    +  +         DR +WK S +G+ S   AY+M++     +P+  +  
Sbjct: 338  DPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFF 397

Query: 361  --IWKLICPQRVKSFLWLASKQKLMTNVNRARRGFTDAADCEQCGHSQESTLHIFRDGPK 534
              +WK+  P+RVK+FLWL   Q +MT   R RR  + +  C+ C    ES LH+ RD P 
Sbjct: 398  NCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPA 457

Query: 535  AQEVWRRVVPRNEFHRFFARPWEEWLHWNLQLDDVVQQTSVQWNTWFAMICWQLWKNRNE 714
               +W RVVP+     FF++   EWL+ NL   D      + W+T FA+I W  WK R  
Sbjct: 458  QLGIWVRVVPQRRQQGFFSKSLFEWLYDNL--GDRSGCEDIPWSTIFAVIIWWGWKWRCG 515

Query: 715  FTFTGESKSGNDVLIVA-WTLARHSTEGSRIEVHRLDSSRLQREQMTKWQQPSVGWIKLN 891
              F   +K  + V  V  W +  +      + V  +   R++R  M  W  P VGW+K+N
Sbjct: 516  NIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVG-ITQPRVER--MIGWVSPCVGWVKVN 572

Query: 892  SDGARDTGTGWASAGGVVRNHLGQWICGYGRAIGFCSDLQAELWACLDGLSLAWERGFRN 1071
            +DGA     G ASAGGV+R+  G W  G+   IG CS  QAELW    GL  AWE+    
Sbjct: 573  TDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPR 632

Query: 1072 IEVELDNEEAVQLI-NGDEDDGNQCAIVRKIRQFRRREWNWQCNHVPRKANKVADAIAKG 1248
            +E+E+D+E  V  +  G  D      +VR    F +++W  +  HV R+AN++AD +A  
Sbjct: 633  VELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANY 692

Query: 1249 SRYQDLPFSVMENPPSQVLQLLADDSASIALP 1344
            +    L F   +  P  +  LL +D+     P
Sbjct: 693  AFSLSLGFHSFDLVPDAMSSLLREDTLGSTRP 724


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score =  223 bits (567), Expect = 1e-55
 Identities = 146/452 (32%), Positives = 218/452 (48%), Gaps = 4/452 (0%)
 Frame = +1

Query: 1    VLQNVYWRVGNGKTINFWSDVWLPEIGPLLPHCLEQDSINIEAKACELVTPYGEWDWNYL 180
            V   V W  G+G+ I FW+D W+     L     E+ +      A +L  P   WD+  +
Sbjct: 169  VSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKI 228

Query: 181  ESLLEINIVHYIAGISAPSPVDPEDRCAWKLSDNGKISAAKAYKMISEQSWDQPSKEAAR 360
            +     N    +  +         DR +WK S +G+ S   AY+M++     +P+  +  
Sbjct: 229  DPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFF 288

Query: 361  --IWKLICPQRVKSFLWLASKQKLMTNVNRARRGFTDAADCEQCGHSQESTLHIFRDGPK 534
              +WK+  P+RVK+FLWL   Q +MT   R RR  + +  C+ C    ES LH+ RD P 
Sbjct: 289  NCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPA 348

Query: 535  AQEVWRRVVPRNEFHRFFARPWEEWLHWNLQLDDVVQQTSVQWNTWFAMICWQLWKNRNE 714
               +W RVVP+     FF++   EWL+ NL   D      + W+T FA+I W  WK R  
Sbjct: 349  QLGIWVRVVPQRRQQGFFSKSLFEWLYDNL--GDRSGCEDIPWSTIFAVIIWWGWKWRCG 406

Query: 715  FTFTGESKSGNDVLIVA-WTLARHSTEGSRIEVHRLDSSRLQREQMTKWQQPSVGWIKLN 891
              F   +K  + V  V  W +  +      + V  +   R++R  M  W  P VGW+K+N
Sbjct: 407  NIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVG-ITQPRVER--MIGWVSPCVGWVKVN 463

Query: 892  SDGARDTGTGWASAGGVVRNHLGQWICGYGRAIGFCSDLQAELWACLDGLSLAWERGFRN 1071
            +DGA     G ASAGGV+R+  G W  G+   IG CS  QAELW    GL  AWE+    
Sbjct: 464  TDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPR 523

Query: 1072 IEVELDNEEAVQLI-NGDEDDGNQCAIVRKIRQFRRREWNWQCNHVPRKANKVADAIAKG 1248
            +E+E+D+E  V  +  G  D      +VR    F +++W  +  HV R+AN++AD +A  
Sbjct: 524  VELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANY 583

Query: 1249 SRYQDLPFSVMENPPSQVLQLLADDSASIALP 1344
            +    L F   +  P  +  LL +D+     P
Sbjct: 584  AFSLSLGFHSFDLVPDAMSSLLREDTLGSTRP 615