BLASTX nr result

ID: Cephaelis21_contig00014017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014017
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   202   9e-50
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   200   5e-49
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             199   6e-49
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             198   2e-48
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             198   2e-48

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score =  202 bits (514), Expect = 9e-50
 Identities = 111/314 (35%), Positives = 164/314 (52%), Gaps = 1/314 (0%)
 Frame = +3

Query: 3    DLVLFCRVSKGQAKLVNEVLKTFMEHSGLKANKSKTKIYFSAGTAESEAREITDILGFQK 182
            DL+LF   S  QA  V   L  F + SG K N+ KT++YFS         +I    GF +
Sbjct: 114  DLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQ 173

Query: 183  VDDLDKYLGVPLLHKRVTKSTYQFIVDKVSQKLESWTARQLSFAGRVTLAKSVLLAVPTY 362
            V+ L KYLG  +   R ++  +  I++K+  KL  W  + LS AGR+TL+K V+ ++P Y
Sbjct: 174  VNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYY 233

Query: 363  FMQTTALPIGTCKQIEKVVRNFIWGGEVGKRKSALVKWDTCCQPADNGGLGLRKLQDQNK 542
             MQ   +P   C +IEK+ R F+WG     RK+ LV WD CC P  NGGLG ++    N+
Sbjct: 234  HMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNE 293

Query: 543  SLLMKLGVQLITKKEALWVKVLRSKYRLAEPIPVNL-QRGRKSHLMKSVASIWEIVKQNV 719
            + LMK+   LI + + LW +VL SKY     +  N+  +   S L K++  IW+  K++V
Sbjct: 294  AFLMKMLWNLIKQPDKLWCRVLYSKYGRNNDLNNNISSQPYDSPLWKAIVGIWDDFKRHV 353

Query: 720  HWSMGNGEAIKFWKDVWIPEIGILLPHCLDHSRVDFEARAIDMVTPNGE*NWELLESVLE 899
             W +G+G +  FW D WI     L       S VD      D +  +G  +   L   L 
Sbjct: 354  IWQIGDGRSTNFWLDKWISNNTSLFSSS-TQSYVDTTISVRDAINTSGVWDLNFLMDNLH 412

Query: 900  INLVHYIAGYPAPN 941
            +++V+ I   P P+
Sbjct: 413  VDIVNQILALPTPS 426


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score =  200 bits (508), Expect = 5e-49
 Identities = 101/268 (37%), Positives = 154/268 (57%), Gaps = 8/268 (2%)
 Frame = +3

Query: 3   DLVLFCRVSKGQAKLVNEVLKTFMEHSGLKANKSKTKIYFSAGTAESEAREITDILGFQK 182
           DL+LF   S  Q +++  VL+ F   SG K +  K+KI+FS   +    + I+D  G   
Sbjct: 209 DLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLISDESGISS 268

Query: 183 VDDLDKYLGVPLLHKRVTKSTYQFIVDKVSQKLESWTARQLSFAGRVTLAKSVLLAVPTY 362
             +L KYLG+P+L +R+ K T+  I++K++ +L  W  R LS AGRVTL K+VL ++P +
Sbjct: 269 TRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVH 328

Query: 363 FMQTTALPIGTCKQIEKVVRNFIWGGEVGKRKSALVKWDTCCQPADNGGLGLRKLQDQNK 542
            M T ALP  T   ++KV R+F+WG  V +RK  L+ W   C+P   GGLG+RK QD NK
Sbjct: 329 TMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNK 388

Query: 543 SLLMKLGVQLITKKEALWVKVLRSKYRLAEPIPVNLQRGRKSHLMKSVASIW-------- 698
           +LL K+G +LI    +LW +++R  YR+ +     ++ G  + +    +S W        
Sbjct: 389 ALLSKVGWRLIQDYHSLWARIMRCNYRVQD-----VRDGAWTKVRSVCSSTWRSVALGMR 443

Query: 699 EIVKQNVHWSMGNGEAIKFWKDVWIPEI 782
           E+V   + W +G+G  I FW D W+  I
Sbjct: 444 EVVIPGLSWVIGDGREILFWMDKWLTNI 471


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  199 bits (507), Expect = 6e-49
 Identities = 108/312 (34%), Positives = 172/312 (55%), Gaps = 2/312 (0%)
 Frame = +3

Query: 3    DLVLFCRVSKGQAKLVNEVLKTFMEHSGLKANKSKTKIYFSAGTAESEAREITDILGFQK 182
            DL+LF   S+ QA+++ + L +F + SGLK N SK+ ++ S+       R I  IL    
Sbjct: 1220 DLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPV 1279

Query: 183  VDDLDKYLGVPLLHKRVTKSTYQFIVDKVSQKLESWTARQLSFAGRVTLAKSVLLAVPTY 362
             + L  YLG+P+L +RV+++T+  ++DK+  KL SW A  L+ AGR  L ++ L  VPTY
Sbjct: 1280 AESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTY 1339

Query: 363  FMQTTALPIGTCKQIEKVVRNFIWGGEVGKRKSALVKWDTCCQPADNGGLGLRKLQDQNK 542
             MQ  ALP+ TC +I+K  RNF+WG +   RK   V W   C+P + GGLGLR  +D N+
Sbjct: 1340 TMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNR 1399

Query: 543  SLLMKLGVQLITKKEALWVKVLRSKYRLAEPIPVNLQRGRKSHLMKSVASIWEIVKQNVH 722
            + L K+  Q+ +  + LWVKVLR KY           +   S   +S+    +++   + 
Sbjct: 1400 AFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIK 1459

Query: 723  WSMGNGEAIKFWKDVWIPEIGILLPH--CLDHSRVDFEARAIDMVTPNGE*NWELLESVL 896
            W++GNG  I FW D W+ + G L  +  C++   +  + +  D+ T     +   L ++L
Sbjct: 1460 WNVGNGRKINFWNDWWVGD-GPLASNTDCINQPHMT-DIKVEDLTTSQRRWDTGALHNIL 1517

Query: 897  EINLVHYIAGYP 932
             IN++  +   P
Sbjct: 1518 PINMIDMVRATP 1529


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  198 bits (503), Expect = 2e-48
 Identities = 107/312 (34%), Positives = 171/312 (54%), Gaps = 2/312 (0%)
 Frame = +3

Query: 3    DLVLFCRVSKGQAKLVNEVLKTFMEHSGLKANKSKTKIYFSAGTAESEAREITDILGFQK 182
            DL+LF   S+ QA+++ + L +F   SGLK N SK+ ++ S+       R I  IL    
Sbjct: 688  DLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPV 747

Query: 183  VDDLDKYLGVPLLHKRVTKSTYQFIVDKVSQKLESWTARQLSFAGRVTLAKSVLLAVPTY 362
             + L  YLG+P+L +RV+++T+  ++DK+  KL SW A  L+ AGR  L ++ L  VPTY
Sbjct: 748  AESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTY 807

Query: 363  FMQTTALPIGTCKQIEKVVRNFIWGGEVGKRKSALVKWDTCCQPADNGGLGLRKLQDQNK 542
             MQ  ALP+ TC +I+K  RNF+WG +   RK   V W   C+P + GGLGLR  +D N+
Sbjct: 808  TMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNR 867

Query: 543  SLLMKLGVQLITKKEALWVKVLRSKYRLAEPIPVNLQRGRKSHLMKSVASIWEIVKQNVH 722
            + L K+  Q+ +  + LWVKVLR KY           +   S   +S+    +++   + 
Sbjct: 868  AFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIK 927

Query: 723  WSMGNGEAIKFWKDVWIPEIGILLPH--CLDHSRVDFEARAIDMVTPNGE*NWELLESVL 896
            W++GNG  I FW D W+ + G L  +  C++   +  + +  D++T     +   L ++L
Sbjct: 928  WNVGNGRKINFWNDWWVGD-GPLASNTDCINQPHMT-DIKVEDLITSQRRWDTGALHNIL 985

Query: 897  EINLVHYIAGYP 932
              N++  +   P
Sbjct: 986  PTNMIDMVRATP 997


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  198 bits (503), Expect = 2e-48
 Identities = 107/312 (34%), Positives = 171/312 (54%), Gaps = 2/312 (0%)
 Frame = +3

Query: 3    DLVLFCRVSKGQAKLVNEVLKTFMEHSGLKANKSKTKIYFSAGTAESEAREITDILGFQK 182
            DL+LF   S+ QA+++ + L +F   SGLK N SK+ ++ S+       R I  IL    
Sbjct: 688  DLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPV 747

Query: 183  VDDLDKYLGVPLLHKRVTKSTYQFIVDKVSQKLESWTARQLSFAGRVTLAKSVLLAVPTY 362
             + L  YLG+P+L +RV+++T+  ++DK+  KL SW A  L+ AGR  L ++ L  VPTY
Sbjct: 748  AESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTY 807

Query: 363  FMQTTALPIGTCKQIEKVVRNFIWGGEVGKRKSALVKWDTCCQPADNGGLGLRKLQDQNK 542
             MQ  ALP+ TC +I+K  RNF+WG +   RK   V W   C+P + GGLGLR  +D N+
Sbjct: 808  TMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNR 867

Query: 543  SLLMKLGVQLITKKEALWVKVLRSKYRLAEPIPVNLQRGRKSHLMKSVASIWEIVKQNVH 722
            + L K+  Q+ +  + LWVKVLR KY           +   S   +S+    +++   + 
Sbjct: 868  AFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIK 927

Query: 723  WSMGNGEAIKFWKDVWIPEIGILLPH--CLDHSRVDFEARAIDMVTPNGE*NWELLESVL 896
            W++GNG  I FW D W+ + G L  +  C++   +  + +  D++T     +   L ++L
Sbjct: 928  WNVGNGRKINFWNDWWVGD-GPLASNTDCINQPHMT-DIKVEDLITSQRRWDTGALHNIL 985

Query: 897  EINLVHYIAGYP 932
              N++  +   P
Sbjct: 986  PTNMIDMVRATP 997


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