BLASTX nr result

ID: Cephaelis21_contig00013966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013966
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...    67   2e-09
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...    62   6e-08
ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine...    60   1e-07
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...    59   4e-07

>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/91 (42%), Positives = 55/91 (60%)
 Frame = +2

Query: 2   KKN*SAKLLPLRSFASELLVDSIETSDIVEED*MLLRNVPVGIPGTALVASLLRDGWSVS 181
           KK      LPL SFA+E  ++SIE   +VEE+ +L+  +PVG+ GTAL ASLLRDGWS++
Sbjct: 356 KKTDGVNNLPLSSFATESWMESIEADSMVEENSLLVPRIPVGVSGTALAASLLRDGWSLA 415

Query: 182 YKVSEISESFC*VADPIYVGLSCHDRLSRNE 274
              ++  E    V D +      H++L R E
Sbjct: 416 KMYAKYQE----VVDALR-----HEQLGRKE 437


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/84 (39%), Positives = 52/84 (61%)
 Frame = +2

Query: 23  LLPLRSFASELLVDSIETSDIVEED*MLLRNVPVGIPGTALVASLLRDGWSVSYKVSEIS 202
           LLPL S   E   DS+++S+I++++ +L+  +PVG+ GTAL ASLLRDGWS++   ++  
Sbjct: 363 LLPLGSLTIERWKDSLDSSEIIDDNNLLVPRIPVGVSGTALAASLLRDGWSLAKMYTKYQ 422

Query: 203 ESFC*VADPIYVGLSCHDRLSRNE 274
           E+         V    H++L R E
Sbjct: 423 EA---------VDALRHEQLGRKE 437


>ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2088

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   KKN*SAKLLPLRSFASELLVDSIETSDIVEED*MLL-RNVPVGIPGTALVASLLRDGWSV 178
           KK      LPL SFA+E  ++ IE   +VEE+ +LL   +PVG+ GTAL ASLLRDGWS+
Sbjct: 356 KKTDGVNNLPLSSFATEPWMEPIEADTMVEENSLLLVPRIPVGVSGTALAASLLRDGWSL 415

Query: 179 SYKVSEISESFC*VADPIYVGLSCHDRLSRNE 274
           +   ++  E+         +    H++L R E
Sbjct: 416 AKMYAKYQEA---------IDALRHEQLGRKE 438


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/91 (35%), Positives = 51/91 (56%)
 Frame = +2

Query: 2   KKN*SAKLLPLRSFASELLVDSIETSDIVEED*MLLRNVPVGIPGTALVASLLRDGWSVS 181
           +K     LLPL S+ +E  +D +   D+ + + M++  +PVG+ GTAL ASLLRDGWS++
Sbjct: 356 RKTNELSLLPLNSYTTERWMDPLNNDDLADGNSMVVSKIPVGVSGTALAASLLRDGWSLA 415

Query: 182 YKVSEISESFC*VADPIYVGLSCHDRLSRNE 274
              ++  E+         V    H++L R E
Sbjct: 416 KMYAKYQEA---------VDALRHEQLGRKE 437


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +2

Query: 23  LLPLRSFASELL-VDSIETSDIVEED*MLLRNVPVGIPGTALVASLLRDGWSVSYKVSEI 199
           LLPL S  +    +DS +T+D+VE++ ML+  +P G+ GTAL ASLLRDGWS++   S+ 
Sbjct: 363 LLPLSSLITGTTWLDSFQTNDMVEDNCMLVPKIPAGVSGTALAASLLRDGWSLAKMYSKY 422

Query: 200 SES 208
            E+
Sbjct: 423 QEA 425


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