BLASTX nr result

ID: Cephaelis21_contig00013926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013926
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...   385   e-105
ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...   384   e-104
gb|ABK24375.1| unknown [Picea sitchensis]                             272   1e-70
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...   268   3e-69
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   264   4e-68

>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score =  385 bits (990), Expect = e-105
 Identities = 195/311 (62%), Positives = 236/311 (75%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927 MGIRSDLLICTTLECETKEEMLASIGKAKEEGANLVELCIDSLSFSHISEVEDLLRRRTL 748
           M  +++LL+CT LECET  EML+ + KA+ EGA+LVEL +DS+SFSHIS+VE L++ RTL
Sbjct: 1   MAFQNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMSFSHISQVEKLIKLRTL 60

Query: 747 PSIVSYRSHSSR--GRGCSKKTCLQIFRLAXXXXXXXXXXXXXXXXDKFMNELMXXXXXX 574
           P+IVS+R  +S+    G SKKTCLQ+  LA                D  M E +      
Sbjct: 61  PAIVSFRPKTSKISSNGDSKKTCLQVLSLALDLDVEFVEMEYEVASDVSMAEYIYNRSSG 120

Query: 573 XXXXXSYVNGGIPCKEKLGNLVTCLQSTGADIVKLVVDVAYITDVAPVFHMLTHSQIPLI 394
                SYVNGG P  EKLGNL+  LQSTGAD++KLV++V YITD+APVF ML H Q+PLI
Sbjct: 121 KLIVSSYVNGGKPSAEKLGNLIANLQSTGADVIKLVINVDYITDLAPVFKMLAHCQVPLI 180

Query: 393 ARAAGERGLVSQLLGPKYGAFVVWGSLGDKTVPGLPPLRSIKQVYKLENLNPDTKVFGLI 214
           A A G RGL+SQLLGPK+G F+V+GSL DK VPG+P L S++ VYKLE +N DTKVFGLI
Sbjct: 181 ALAVGSRGLISQLLGPKFGGFLVYGSLRDKAVPGMPTLFSLRHVYKLEYINSDTKVFGLI 240

Query: 213 SNPVGHSKGPLLHNPAFRHTGYNGIYVPLLVDNVKEFFRVYSSSDFSGFSVGIPHKEAAV 34
           SNPVGHSKGP+LHNPAFRHTGYNGIYVP+ VD++KEFFR Y+S+DF+GFSVGIPHKEAAV
Sbjct: 241 SNPVGHSKGPILHNPAFRHTGYNGIYVPMQVDDIKEFFRTYTSTDFAGFSVGIPHKEAAV 300

Query: 33  GCCDEVDPLAK 1
            CCDEV PLAK
Sbjct: 301 SCCDEVHPLAK 311


>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score =  384 bits (985), Expect = e-104
 Identities = 196/311 (63%), Positives = 234/311 (75%), Gaps = 2/311 (0%)
 Frame = -3

Query: 927 MGIRSDLLICTTLECETKEEMLASIGKAKEEGANLVELCIDSLSFSHISEVEDLLRRRTL 748
           M  +++LL+CT LECET  EML+S+ +A+ EGA+L EL +DSLSFSH SEVE L+++RTL
Sbjct: 1   MAFKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLSFSHNSEVEKLIKQRTL 60

Query: 747 PSIVSYRSHSSR--GRGCSKKTCLQIFRLAXXXXXXXXXXXXXXXXDKFMNELMXXXXXX 574
           PSIVS+R   SR       K TCLQ+ RLA                +  M E +      
Sbjct: 61  PSIVSFRLEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDDMAEYVYNRSNT 120

Query: 573 XXXXXSYVNGGIPCKEKLGNLVTCLQSTGADIVKLVVDVAYITDVAPVFHMLTHSQIPLI 394
                SYVNG  P  E+LG L+ C+QSTGAD++KLV+DV  ITD+APVF MLTH QIPLI
Sbjct: 121 KLIVSSYVNGRKPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLI 180

Query: 393 ARAAGERGLVSQLLGPKYGAFVVWGSLGDKTVPGLPPLRSIKQVYKLENLNPDTKVFGLI 214
           A A G RGL+SQLLGPK+G F+V+GSL DK VPG+P L S++Q+YKLE +N DTKVFGLI
Sbjct: 181 ALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLI 240

Query: 213 SNPVGHSKGPLLHNPAFRHTGYNGIYVPLLVDNVKEFFRVYSSSDFSGFSVGIPHKEAAV 34
           SNPVGHSKGP+LHNPAFRHTGYNGIYVP+ VD+VKEFFR Y+SSDF+GFSVGIPHKEAAV
Sbjct: 241 SNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAV 300

Query: 33  GCCDEVDPLAK 1
           GCCDEV PLAK
Sbjct: 301 GCCDEVHPLAK 311


>gb|ABK24375.1| unknown [Picea sitchensis]
          Length = 514

 Score =  272 bits (695), Expect = 1e-70
 Identities = 143/309 (46%), Positives = 198/309 (64%), Gaps = 3/309 (0%)
 Frame = -3

Query: 918 RSDLLICTTLECETKEEMLASIGKAKEEGANLVELCIDSLSFSHISEVEDLLRRRTLPSI 739
           ++  L+C+ L  ET EEML+ +  AK+ GA+ +E+ +D L+    +++E LL+ R LP+I
Sbjct: 3   QNGFLVCSPLMAETVEEMLSQMQHAKDVGADCIEIRLDCLNGYATTDLEQLLKARVLPTI 62

Query: 738 VSYRSHSSRGR-GCSKKTCLQIFRLAXXXXXXXXXXXXXXXXDKFMNELMXXXXXXXXXX 562
           V+YR  S  G+    +K  L   RLA                D                 
Sbjct: 63  VTYRLKSEGGKYEVDEKKRLDTLRLAHELGADFIDVELQVAFDFVSRIKDKKSSNCKIIV 122

Query: 561 XSYVNGGIPCKEKLGNLVTCLQSTGADIVKLVVDVAYITDVAPVFHMLTHSQIPLIARAA 382
            ++++G  P  E L +LV  +QSTGADI+K+V     ITDV+ VF ++ H Q+P+IA   
Sbjct: 123 SNHISGRTPSTEDLSHLVVNMQSTGADILKIVTTATNITDVSRVFQLIPHCQVPIIACVT 182

Query: 381 GERGLVSQLLGPKYGAFVVWGSLGD--KTVPGLPPLRSIKQVYKLENLNPDTKVFGLISN 208
           G+RGL+SQLLGPK+G ++++GS+G    + PG P L  +   YK+  LN DTKVFG+I+N
Sbjct: 183 GDRGLISQLLGPKFGGYLIYGSIGSGKDSTPGQPKLADLTGHYKIGRLNSDTKVFGVIAN 242

Query: 207 PVGHSKGPLLHNPAFRHTGYNGIYVPLLVDNVKEFFRVYSSSDFSGFSVGIPHKEAAVGC 28
           PVGHSKGP+LHN AFR  G+NG+YVPLLVDN+ +F +VYS+ DF+GFSVGIPHKEAAV C
Sbjct: 243 PVGHSKGPILHNQAFRDAGFNGVYVPLLVDNLADFLKVYSAPDFAGFSVGIPHKEAAVTC 302

Query: 27  CDEVDPLAK 1
           CDEV PLA+
Sbjct: 303 CDEVQPLAQ 311


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score =  268 bits (684), Expect = 3e-69
 Identities = 139/309 (44%), Positives = 195/309 (63%), Gaps = 2/309 (0%)
 Frame = -3

Query: 921 IRSDLLICTTLECETKEEMLASIGKAKEEGANLVELCIDSL-SFSHISEVEDLLRRRTLP 745
           + S +++CT L  ++ E+M++ +  AK +GA++VE+ +D + +F    +++ +LR + LP
Sbjct: 7   LTSSVMVCTPLMAQSVEQMISDMYNAKTQGADVVEVRLDYIDNFQPPQDLQAILRNKPLP 66

Query: 744 SIVSYRSHSSRGR-GCSKKTCLQIFRLAXXXXXXXXXXXXXXXXDKFMNELMXXXXXXXX 568
            I+ YR  S  G     + T L+  RLA                D               
Sbjct: 67  VIIVYRPKSEGGLYEGDEPTRLEALRLAYVLGADYVDFELKVASDLIGELKGTHHTGSKV 126

Query: 567 XXXSYVNGGIPCKEKLGNLVTCLQSTGADIVKLVVDVAYITDVAPVFHMLTHSQIPLIAR 388
               YVNG +P KE L  LV  +Q+TGADI+KLV     IT++  +FH++ H Q+P+IA 
Sbjct: 127 IVSCYVNGDMPTKENLSQLVASMQATGADIIKLVSTANNITELDRIFHLILHCQVPIIAY 186

Query: 387 AAGERGLVSQLLGPKYGAFVVWGSLGDKTVPGLPPLRSIKQVYKLENLNPDTKVFGLISN 208
           + GERGL+SQLL PK+G  +++GS+   ++PGLP L S+++ YK+  +N DTKVFGL+S 
Sbjct: 187 SVGERGLISQLLSPKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKVFGLVSK 246

Query: 207 PVGHSKGPLLHNPAFRHTGYNGIYVPLLVDNVKEFFRVYSSSDFSGFSVGIPHKEAAVGC 28
           PV HSKGPLLHNP FRH  YNG YVP+ VD++KEFF VYSS DF+GFSVG P+KEA V  
Sbjct: 247 PVSHSKGPLLHNPTFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYKEAVVEF 306

Query: 27  CDEVDPLAK 1
           CDEV PLAK
Sbjct: 307 CDEVHPLAK 315


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  264 bits (674), Expect = 4e-68
 Identities = 140/309 (45%), Positives = 199/309 (64%), Gaps = 2/309 (0%)
 Frame = -3

Query: 921 IRSDLLICTTLECETKEEMLASIGKAKEEGANLVELCIDSLSFSHISE-VEDLLRRRTLP 745
           ++ + +ICT L  ++ E+M+  + KAK EGA+LVE+ +D ++  H  + +E +LR + LP
Sbjct: 7   LKKETMICTPLMGQSVEQMVRDMHKAKVEGADLVEVRLDYINNFHPQQDLEIILRNKPLP 66

Query: 744 SIVSYRSHSSRGR-GCSKKTCLQIFRLAXXXXXXXXXXXXXXXXDKFMNELMXXXXXXXX 568
            ++ YR     G+    + + L+   LA                D    + M        
Sbjct: 67  VMIVYRPKWEGGQYEGDEHSRLEALHLAEKLGADYIDFELKVASDFLGKQKMDQHSSSRT 126

Query: 567 XXXSYVNGGIPCKEKLGNLVTCLQSTGADIVKLVVDVAYITDVAPVFHMLTHSQIPLIAR 388
               YV+G  P  E L   V  LQSTGAD++KLV++   IT++  +FH+L+H Q+PLIA 
Sbjct: 127 IVSCYVDGVTPPIEDLICRVALLQSTGADMIKLVINATNITEITKIFHLLSHCQMPLIAY 186

Query: 387 AAGERGLVSQLLGPKYGAFVVWGSLGDKTVPGLPPLRSIKQVYKLENLNPDTKVFGLISN 208
           + G+RG +SQ+L  K+G F+V+GS+    V GLP L S+++ YK++ +N DTKVFGLIS 
Sbjct: 187 SIGDRGFMSQILCRKFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISK 246

Query: 207 PVGHSKGPLLHNPAFRHTGYNGIYVPLLVDNVKEFFRVYSSSDFSGFSVGIPHKEAAVGC 28
           PVGHSKGP+LHNPAFRH  YNGIYVP+LVD++KEFF +YSS DF+GFSVGIP+KEA  G 
Sbjct: 247 PVGHSKGPILHNPAFRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGF 306

Query: 27  CDEVDPLAK 1
           CDE+ PLA+
Sbjct: 307 CDELHPLAQ 315


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