BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013884
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab...    90   5e-16
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl...    88   2e-15
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi...    87   3e-15
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec...    87   3e-15
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c...    83   6e-14

>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
           lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
           ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = +3

Query: 54  SLSAMLSTRMMVAMPNPLAITKIKAIPPPGTPARGGRETRGLVIECSSRPQKKATSHHKK 233
           S+SA+  T ++    +P+    ++    P     GG    G+VIECSSRPQKK+T+HH+K
Sbjct: 2   SVSAIFGTGIVTVAASPV----LRQFQVPTLGNGGGL---GMVIECSSRPQKKSTAHHRK 54

Query: 234 TRPRKTQPWDIRRGPTVYXXXXXXXXEW---TLVTDDAAAKSAVPSQETV 374
           +RP+KTQPWDI+R PTVY        EW   TL +DD  A +A P+ + V
Sbjct: 55  SRPKKTQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGATAAAPAGDLV 104


>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
          Length = 108

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 42/61 (68%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = +3

Query: 180 VIECSSRPQKKATSHHKKTRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVTDDA-AAKSAV 356
           VIECSSRPQKK TSHH KTRPRKTQPWDI+R PTVY        EWT+V+ DA A+ +AV
Sbjct: 36  VIECSSRPQKKGTSHHMKTRPRKTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAAV 95

Query: 357 P 359
           P
Sbjct: 96  P 96


>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
           gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
           ribosomal protein 6, chloroplastic; AltName: Full=CL25;
           AltName: Full=Plastid-specific 50S ribosomal protein 6;
           Short=PSRP-6; Flags: Precursor
           gi|10177888|dbj|BAB11220.1| unnamed protein product
           [Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
           AT5g17870/MPI7_10 [Arabidopsis thaliana]
           gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
           [Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
           plastid-specific ribosomal protein 6 precursor
           (Psrp-6)-like [Arabidopsis thaliana]
           gi|332005097|gb|AED92480.1| plastid-specific 50S
           ribosomal protein 6 [Arabidopsis thaliana]
          Length = 106

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 47/103 (45%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 54  SLSAMLSTRMMVAMPNPLAITKIKAIPPPGTPARGGRETRGLVIECSSRPQKKATSHHKK 233
           S+SA+  T ++    +P+    ++    P     GG    G+VIECSSRPQKK+T+HH+K
Sbjct: 2   SVSAIFGTGIVTVAASPV----LRQFQVPKLGNGGGL---GMVIECSSRPQKKSTAHHRK 54

Query: 234 TRPRKTQPWDIRRGPTVYXXXXXXXXEW---TLVTDDAAAKSA 353
           TRP+KTQPWDI+R PTVY        EW   TL +DD  A +A
Sbjct: 55  TRPKKTQPWDIKRKPTVYAPLPPLPAEWSPFTLASDDGGAATA 97


>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
           ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis]
          Length = 126

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = +3

Query: 54  SLSAMLSTRMMVAMPNPLAITKIKAIPPPGTPARGGRETRGLVIECSSRPQKKATSHHKK 233
           S+S++  + +++     L    ++    P T    G  + GLVIECSSRP+KKAT+HH K
Sbjct: 2   SISSIFGSPVVLLSKASLKQLNVEVKSAPKTATGNGWYSGGLVIECSSRPKKKATAHHMK 61

Query: 234 TRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVT 329
           TRP+K+QPWDIRR PTVY        +WTLV+
Sbjct: 62  TRPKKSQPWDIRRKPTVYPPLPPLPPDWTLVS 93


>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
           Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
           protein 6; Short=PSRP-6; Flags: Precursor
           gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
           ribosomal protein 6 precursor [Spinacia oleracea]
          Length = 116

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
 Frame = +3

Query: 54  SLSAMLSTRMMVAMPNPLAITKIKAIPPPGTPARGGRETRGLV-IECSSRPQKKATSHHK 230
           S+SA+   R+ V +P+ L  + +        P+ GG    G++ IECSSRPQKK T+HH 
Sbjct: 2   SVSAIFGARV-VTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60

Query: 231 KTRPRKTQPWDIRRGPTVYXXXXXXXXEWTLVT---DDAAAKSAVPSQETVV 377
           KTRP+KT  WDI+RGP VY        EWT+V+   D+A + S+  S    +
Sbjct: 61  KTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSAVDEADSSSSTTSSSAEI 112