BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013857
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   165   3e-39
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   155   3e-36
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   152   4e-35
emb|CAA12932.1| reverse transcriptase [Pinus elliottii]               151   5e-35
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   151   7e-35

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score =  165 bits (418), Expect = 3e-39
 Identities = 84/177 (47%), Positives = 119/177 (67%)
 Frame = -1

Query: 536 DGFSGKFFQVSWNIIVKDVILAVQDFFLGADFPRASSSSLISLIPKVFNPKSYSDFRPIS 357
           +GF G F+Q  W+I+  DVI +VQDFF+     +  +S+LI LIPKV   +   D+RPI+
Sbjct: 463 NGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIA 522

Query: 356 LCNFTNKILSKILASRLENIIPKIISKEESGFIKGRLITDNILLAKELIGSLSKKTRGSN 177
           L NF  KI+SKILA RL +I  +IIS E+ GFI+ R I+  ++LA E I  L K+  G N
Sbjct: 523 LANFQFKIISKILADRLADITMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYGGN 582

Query: 176 VVLKLNMAKAFDRVSWSYLMAVQRAFGFGEKWIDWTWRILSANHFSLLINGEYQGFF 6
           V LK+++AKAFD + W++L+AV + FGF EK++ W   IL +   S+L+NG+  GFF
Sbjct: 583 VALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFF 639


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  155 bits (393), Expect = 3e-36
 Identities = 81/178 (45%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
 Frame = -1

Query: 536 DGFSGKFFQVSWNIIVKDVILAVQDFF-LGADFPRASSSSLISLIPKVFNPKSYSDFRPI 360
           DGF   F+Q+ W+I+ +DVI AV  FF  G   P  ++++LI LIPK  N  S   FRPI
Sbjct: 137 DGFGSCFYQIYWDIVKEDVIKAVLQFFNTGWILPNFNANTLI-LIPKTQNADSMDQFRPI 195

Query: 359 SLCNFTNKILSKILASRLENIIPKIISKEESGFIKGRLITDNILLAKELIGSLSKKTRGS 180
           ++ NF  KI+SKILA RL  I+P I+S+E+ GFI+GR I D + LA E I  L +K+ G 
Sbjct: 196 AMANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGRNIKDCVCLASEAINMLDQKSFGG 255

Query: 179 NVVLKLNMAKAFDRVSWSYLMAVQRAFGFGEKWIDWTWRILSANHFSLLINGEYQGFF 6
           N+  K++++KAFD ++W +L+ V + FGF E + +W   IL +   S+ ING  QG+F
Sbjct: 256 NLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQGYF 313


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/177 (44%), Positives = 108/177 (61%)
 Frame = -1

Query: 536 DGFSGKFFQVSWNIIVKDVILAVQDFFLGADFPRASSSSLISLIPKVFNPKSYSDFRPIS 357
           D F   FFQ+ WNI+ KDV  AV DFF     P   +++ I LIPK  N  S   +R I+
Sbjct: 198 DVFGACFFQIYWNIVKKDVYEAVLDFFKNGWLPNNFNANSIILIPKTPNADSVDQYRTIA 257

Query: 356 LCNFTNKILSKILASRLENIIPKIISKEESGFIKGRLITDNILLAKELIGSLSKKTRGSN 177
           L NF  KI++K+LA RL  I+P IISKE+ GF++GR I D I L  E I  L  K+ G N
Sbjct: 258 LVNFKFKIINKVLADRLAKILPSIISKEQRGFVQGRNIRDCIALTSEAINVLDNKSFGGN 317

Query: 176 VVLKLNMAKAFDRVSWSYLMAVQRAFGFGEKWIDWTWRILSANHFSLLINGEYQGFF 6
           + LK+++ KAFD ++W +L+ V + FGF E + +W   IL ++   + +NG   GFF
Sbjct: 318 LALKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFISMNGAQHGFF 374


>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
          Length = 194

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/172 (43%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
 Frame = -1

Query: 536 DGFSGKFFQVSWNIIVKDVILAVQDFFLGADFPRASSSSLISLIPKVFNPKSYSDFRPIS 357
           DG +  F++V W I+  D+   V+D        ++ +S+ I+L+PKV    +   FRPI+
Sbjct: 5   DGITINFYKVCWEIVKNDIWEIVEDSRRSKTILKSLNSTFIALVPKVEEAHTPEKFRPIA 64

Query: 356 LCNFTNKILSKILASRLENIIPKIISKEESGFIKGRLITDNILLAKELIGSL-SKKTRGS 180
           LCN   KI+SK++A+RL+ I+P IIS+E+SG+++GR I DNILLA+E+I SL S+K  G 
Sbjct: 65  LCNVIYKIISKVIANRLKIILPGIISQEQSGYVEGRQILDNILLAQEMIHSLHSRKVAG- 123

Query: 179 NVVLKLNMAKAFDRVSWSYLMAVQRAFGFGEKWIDWTWRILSANHFSLLING 24
            ++++L+++KA+D+VSW+YL A+ +AFGF   WI W   ++ +  +S+L+NG
Sbjct: 124 -MLIQLDLSKAYDKVSWTYLEAILKAFGFSRPWIKWVLELIKSMRYSVLVNG 174


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  151 bits (381), Expect = 7e-35
 Identities = 71/178 (39%), Positives = 113/178 (63%)
 Frame = -1

Query: 536 DGFSGKFFQVSWNIIVKDVILAVQDFFLGADFPRASSSSLISLIPKVFNPKSYSDFRPIS 357
           DG++ +F++ SW II  +VI+A+Q FF     P+  +S++++LIPK    +   D+RPIS
Sbjct: 195 DGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPIS 254

Query: 356 LCNFTNKILSKILASRLENIIPKIISKEESGFIKGRLITDNILLAKELIGSLSKKTRGSN 177
            CN   K +SKILA+RL+ I+PK I   +S F+K RL+ +N+LLA EL+    K +  + 
Sbjct: 255 CCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTR 314

Query: 176 VVLKLNMAKAFDRVSWSYLMAVQRAFGFGEKWIDWTWRILSANHFSLLINGEYQGFFK 3
             +K++++KAFD + WS+L  V  A  F  ++I W    +S   FS+ +NGE  G+F+
Sbjct: 315 CAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFR 372