BLASTX nr result
ID: Cephaelis21_contig00013834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00013834
(1412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 202 2e-49
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 198 3e-48
emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] 198 3e-48
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ... 197 6e-48
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 192 2e-46
>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
gi|222833309|gb|EEE71786.1| PAF1 complex component
[Populus trichocarpa]
Length = 1056
Score = 202 bits (513), Expect = 2e-49
Identities = 99/148 (66%), Positives = 123/148 (83%)
Frame = -1
Query: 1382 KSMQYPIDASASIHLYKDLNLFHRLEEQGIAVELPFNKVSTLFNLARLLEQSHYMETASI 1203
K+ Y +DA++S+ YKD+ +F RLEE+G +VEL +NKV+TLFNLARLLEQ H ETAS
Sbjct: 484 KANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHNTETAST 543
Query: 1202 FYRLILYKYPDYTDAYLRLAAIAKARNNVLISTELISDAFKVDEKCPDALLMLGDLELKN 1023
YRLIL+KYPDY DAYLRLAAIAKARNN+ +S EL+++A V++KCP+AL MLGDLELKN
Sbjct: 544 LYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLGDLELKN 603
Query: 1022 DDWVKAKETFHAAKDMSNGDDSYASLCL 939
DDWVKAKETF AA + ++G DSYA+L L
Sbjct: 604 DDWVKAKETFRAASEATDGKDSYATLSL 631
Score = 44.7 bits (104), Expect(2) = 4e-07
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -2
Query: 673 RXSYASLCLGNWNYFAAIRSEKRAP 599
+ SYA+L LGNWNYFAAIR+EKR P
Sbjct: 623 KDSYATLSLGNWNYFAAIRNEKRNP 647
Score = 37.0 bits (84), Expect(2) = 4e-07
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = -1
Query: 611 EKSPKLEATHLEKAKKLYTK 552
+++PKLEATHLEKAK+LYT+
Sbjct: 644 KRNPKLEATHLEKAKELYTR 663
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 198 bits (503), Expect = 3e-48
Identities = 98/148 (66%), Positives = 120/148 (81%)
Frame = -1
Query: 1382 KSMQYPIDASASIHLYKDLNLFHRLEEQGIAVELPFNKVSTLFNLARLLEQSHYMETASI 1203
K+ Y DA S+H +KD+ LFH+LEE G VELP+NKV+ LFNLARLLEQ + +TASI
Sbjct: 487 KAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASI 546
Query: 1202 FYRLILYKYPDYTDAYLRLAAIAKARNNVLISTELISDAFKVDEKCPDALLMLGDLELKN 1023
YRLIL+K+PDY DAYLRLAAIAKARNN+ +S EL+ DA KV++K P++L MLGDLELKN
Sbjct: 547 LYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLGDLELKN 606
Query: 1022 DDWVKAKETFHAAKDMSNGDDSYASLCL 939
DDWVKAKETF +A D ++G DSYA+L L
Sbjct: 607 DDWVKAKETFRSASDATDGKDSYATLSL 634
Score = 48.1 bits (113), Expect(2) = 4e-08
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2
Query: 673 RXSYASLCLGNWNYFAAIRSEKRAP 599
+ SYA+L LGNWNYFAAIRSEKRAP
Sbjct: 626 KDSYATLSLGNWNYFAAIRSEKRAP 650
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = -1
Query: 611 EKSPKLEATHLEKAKKLYTK 552
+++PKLEATHLEKAK+LYT+
Sbjct: 647 KRAPKLEATHLEKAKELYTR 666
>emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
Length = 788
Score = 198 bits (503), Expect = 3e-48
Identities = 98/148 (66%), Positives = 120/148 (81%)
Frame = -1
Query: 1382 KSMQYPIDASASIHLYKDLNLFHRLEEQGIAVELPFNKVSTLFNLARLLEQSHYMETASI 1203
K+ Y DA S+H +KD+ LFH+LEE G VELP+NKV+ LFNLARLLEQ + +TASI
Sbjct: 487 KAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASI 546
Query: 1202 FYRLILYKYPDYTDAYLRLAAIAKARNNVLISTELISDAFKVDEKCPDALLMLGDLELKN 1023
YRLIL+K+PDY DAYLRLAAIAKARNN+ +S EL+ DA KV++K P++L MLGDLELKN
Sbjct: 547 LYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLGDLELKN 606
Query: 1022 DDWVKAKETFHAAKDMSNGDDSYASLCL 939
DDWVKAKETF +A D ++G DSYA+L L
Sbjct: 607 DDWVKAKETFRSASDATDGKDSYATLSL 634
Score = 48.1 bits (113), Expect(2) = 4e-08
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2
Query: 673 RXSYASLCLGNWNYFAAIRSEKRAP 599
+ SYA+L LGNWNYFAAIRSEKRAP
Sbjct: 626 KDSYATLSLGNWNYFAAIRSEKRAP 650
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = -1
Query: 611 EKSPKLEATHLEKAKKLYTK 552
+++PKLEATHLEKAK+LYT+
Sbjct: 647 KRAPKLEATHLEKAKELYTR 666
>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
gi|223544778|gb|EEF46294.1| tpr repeat nuclear
phosphoprotein, putative [Ricinus communis]
Length = 1065
Score = 197 bits (501), Expect = 6e-48
Identities = 97/148 (65%), Positives = 121/148 (81%)
Frame = -1
Query: 1382 KSMQYPIDASASIHLYKDLNLFHRLEEQGIAVELPFNKVSTLFNLARLLEQSHYMETASI 1203
K+ Y IDA+ASI YKD+ FH+LE+ G VEL ++KV+ LFNLARLLEQ H +ETA++
Sbjct: 460 KAKTYTIDAAASILHYKDMQFFHQLEQDGHRVELTWDKVTALFNLARLLEQMHNIETANV 519
Query: 1202 FYRLILYKYPDYTDAYLRLAAIAKARNNVLISTELISDAFKVDEKCPDALLMLGDLELKN 1023
Y LIL+KYPDY DAYLRLAAI+KARNN+ +S EL+++A KV++KCP+AL MLGDLELKN
Sbjct: 520 LYVLILFKYPDYVDAYLRLAAISKARNNLQLSIELVNEALKVNDKCPNALSMLGDLELKN 579
Query: 1022 DDWVKAKETFHAAKDMSNGDDSYASLCL 939
DDWVKAKETF AA + ++G DSYA L L
Sbjct: 580 DDWVKAKETFRAASEATDGKDSYAILSL 607
Score = 43.5 bits (101), Expect(2) = 9e-07
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 673 RXSYASLCLGNWNYFAAIRSEKRAP 599
+ SYA L LGNWNYFAAIR+EKR P
Sbjct: 599 KDSYAILSLGNWNYFAAIRNEKRNP 623
Score = 37.0 bits (84), Expect(2) = 9e-07
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = -1
Query: 611 EKSPKLEATHLEKAKKLYTK 552
+++PKLEATHLEKAK+LYT+
Sbjct: 620 KRNPKLEATHLEKAKELYTR 639
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 192 bits (488), Expect = 2e-46
Identities = 96/142 (67%), Positives = 115/142 (80%)
Frame = -1
Query: 1364 IDASASIHLYKDLNLFHRLEEQGIAVELPFNKVSTLFNLARLLEQSHYMETASIFYRLIL 1185
IDA+ S +KD+ LFH LE G VE+P++KV+ LFNLARLLEQ + TASIFYRLIL
Sbjct: 492 IDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIFYRLIL 551
Query: 1184 YKYPDYTDAYLRLAAIAKARNNVLISTELISDAFKVDEKCPDALLMLGDLELKNDDWVKA 1005
+KYPDY DAYLRLAAIAKARNN+L+S EL++DA KV+ KCP+AL MLG+LELKNDDWVKA
Sbjct: 552 FKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELKNDDWVKA 611
Query: 1004 KETFHAAKDMSNGDDSYASLCL 939
KET A D ++G DSYA+L L
Sbjct: 612 KETLRTASDATDGKDSYATLSL 633
Score = 44.3 bits (103), Expect(2) = 5e-06
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -2
Query: 673 RXSYASLCLGNWNYFAAIRSEKRAP 599
+ SYA+L LGNWNYFAA+R+EKR P
Sbjct: 625 KDSYATLSLGNWNYFAAVRNEKRNP 649
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = -1
Query: 611 EKSPKLEATHLEKAKKLYTK 552
+++PKLEATHLEKAK+L T+
Sbjct: 646 KRNPKLEATHLEKAKELCTR 665