BLASTX nr result

ID: Cephaelis21_contig00013744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013744
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    56   4e-06

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/90 (36%), Positives = 52/90 (57%)
 Frame = -2

Query: 288 YLFILVAESLS*VLKRLLEDGNIMPYSVPQGSFPITHLSFADVIVIFFRGTRSSMRVFFG 109
           YLFI+VA++ S +++R ++D  +      +    I+HL FAD  ++F R  R    +   
Sbjct: 646 YLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVD 705

Query: 108 FLEHYQLAIGQKISTIKSQFICSKRVSVSR 19
            L  Y+LA GQKI+  KS+   S+ VSVS+
Sbjct: 706 ILNQYELASGQKINYEKSEVSYSRGVSVSQ 735


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/95 (32%), Positives = 55/95 (57%)
 Frame = -2

Query: 288 YLFILVAESLS*VLKRLLEDGNIMPYSVPQGSFPITHLSFADVIVIFFRGTRSSMRVFFG 109
           YLFIL+A++ S ++++ +++  +      +    I+HL FADV ++F R +R    +   
Sbjct: 646 YLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVE 705

Query: 108 FLEHYQLAIGQKISTIKSQFICSKRVSVSRVRAIS 4
            L  Y+ A GQKI+  KS+   SK VS+++   +S
Sbjct: 706 ILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELS 740


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -2

Query: 285 LFILVAESLS*VLKRLLEDGNIMPYSVPQG-SFPITHLSFADVIVIFFRGTRSSMRVFFG 109
           LF LV E LS  L     DG ++P S  +G SFP TH+ +AD ++IF  GT+ ++R    
Sbjct: 655 LFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFP-THILYADDVLIFCTGTKRNIRRLIK 713

Query: 108 FLEHYQLAIGQKISTIKSQFICSKRVSVSRVRAIS 4
               Y    GQ I+  KS+F  S  ++ SRV+ IS
Sbjct: 714 IFSQYSEVSGQLINNAKSRFFTS-AMTGSRVQMIS 747


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