BLASTX nr result

ID: Cephaelis21_contig00013739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013739
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]               78   9e-13
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]    78   9e-13
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...    70   1e-10
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...    70   2e-10
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...    70   2e-10

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
 Frame = -2

Query: 233 CIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKFVE------------EDRAYIERI 90
           C V  DGSY+ KGP LN TRTHLQR LGD N+L+VKF E            +  A   +I
Sbjct: 179 CHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKI 238

Query: 89  CREGIIVGSWRYRFFVF 39
            REGI VG  +YRFFVF
Sbjct: 239 AREGIFVGLRQYRFFVF 255


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
 Frame = -2

Query: 233 CIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKFVE------------EDRAYIERI 90
           C V  DGSY+ KGP LN TRTHLQR LGD N+L+VKF E            +  A   +I
Sbjct: 542 CHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKI 601

Query: 89  CREGIIVGSWRYRFFVF 39
            REGI VG  +YRFFVF
Sbjct: 602 AREGIFVGLRQYRFFVF 618


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/85 (48%), Positives = 47/85 (55%), Gaps = 20/85 (23%)
 Frame = -2

Query: 233 CIVYQDGSYKLK--------GPCLNSTRTHLQRKLGDNNVLIVKFVE------------E 114
           C V  DGSY+ K        GP LN TRTHLQR LGD N+L+VKF E            +
Sbjct: 179 CHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTD 238

Query: 113 DRAYIERICREGIIVGSWRYRFFVF 39
             A   +I REGI VG  +YRFFVF
Sbjct: 239 SNASYNKIAREGIFVGLRQYRFFVF 263


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 953

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
 Frame = -2

Query: 233 CIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKF------------VEEDRAYIERI 90
           C V+ DG+ + KGP L STRTHLQ+ LGD+NVL+VKF             EE  A   + 
Sbjct: 166 CFVFPDGNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEANALYGKF 225

Query: 89  CREGIIVGSWRYRFFVF 39
            +EGI VG   YRFFVF
Sbjct: 226 GKEGIRVGLRLYRFFVF 242


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 13/78 (16%)
 Frame = -2

Query: 233 CIVYQDGSYKLKGPCLNSTRTHLQRKLGDNNVLIVKFVEEDR-------------AYIER 93
           C V  DGS + KGP LN+T+THLQR LGD+NVL+VKF E+               AY  +
Sbjct: 269 CHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPLSNHSGGSFYAY-SK 327

Query: 92  ICREGIIVGSWRYRFFVF 39
           I R+GI++G  RY FFVF
Sbjct: 328 IARDGILLGLRRYHFFVF 345


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