BLASTX nr result

ID: Cephaelis21_contig00013717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013717
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    51   7e-13
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...    51   7e-13
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...    50   2e-12
emb|CBI16387.3| unnamed protein product [Vitis vinifera]               50   2e-12
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...    50   2e-12

>ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           RBP47B'-like [Cucumis sativus]
          Length = 427

 Score = 50.8 bits (120), Expect(2) = 7e-13
 Identities = 30/59 (50%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
 Frame = +2

Query: 560 PDAEHEHYIFVGDSALGVTNLV----------SVRVAKIFSDPNTAWPKEYDFVKFADK 706
           PDA  EH IFVGD A  VT+ +          SVR AK+ +DPNT   K Y FVKFAD+
Sbjct: 107 PDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE 165



 Score = 49.3 bits (116), Expect(2) = 7e-13
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
 Frame = +1

Query: 364 SC*FHSEMNGKDFSI-VVWNKIIG*PKGFGFIEFTSHAIYKRIL*P*NGTQL-----NFR 525
           SC  H+   G+  SI ++ NKI G P+G+GF+EF SHA  +RIL   NGTQ+      FR
Sbjct: 38  SCFAHT---GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFR 94

Query: 526 LKW 534
           L W
Sbjct: 95  LNW 97


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
           sativus]
          Length = 422

 Score = 50.8 bits (120), Expect(2) = 7e-13
 Identities = 30/59 (50%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
 Frame = +2

Query: 560 PDAEHEHYIFVGDSALGVTNLV----------SVRVAKIFSDPNTAWPKEYDFVKFADK 706
           PDA  EH IFVGD A  VT+ +          SVR AK+ +DPNT   K Y FVKFAD+
Sbjct: 107 PDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE 165



 Score = 49.3 bits (116), Expect(2) = 7e-13
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
 Frame = +1

Query: 364 SC*FHSEMNGKDFSI-VVWNKIIG*PKGFGFIEFTSHAIYKRIL*P*NGTQL-----NFR 525
           SC  H+   G+  SI ++ NKI G P+G+GF+EF SHA  +RIL   NGTQ+      FR
Sbjct: 38  SCFAHT---GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFR 94

Query: 526 LKW 534
           L W
Sbjct: 95  LNW 97


>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 447

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
 Frame = +2

Query: 560 PDAEHEHYIFVGDSALGVTNLV----------SVRVAKIFSDPNTAWPKEYDFVKFADK 706
           PDA  EH IFVGD A  VT+ +          SVR AK+ +DPNT   K Y FVKF+D+
Sbjct: 128 PDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186



 Score = 49.3 bits (116), Expect(2) = 2e-12
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
 Frame = +1

Query: 364 SC*FHSEMNGKDFSI-VVWNKIIG*PKGFGFIEFTSHAIYKRIL*P*NGTQL-----NFR 525
           SC  H+   G+  SI ++ NKI G P+G+GF+EF SHA  +RIL   NGTQ+      FR
Sbjct: 59  SCFAHT---GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFR 115

Query: 526 LKW 534
           L W
Sbjct: 116 LNW 118


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
 Frame = +2

Query: 560 PDAEHEHYIFVGDSALGVTNLV----------SVRVAKIFSDPNTAWPKEYDFVKFADK 706
           PDA  EH IFVGD A  VT+ +          SVR AK+ +DPNT   K Y FVKF+D+
Sbjct: 128 PDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186



 Score = 49.3 bits (116), Expect(2) = 2e-12
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
 Frame = +1

Query: 364 SC*FHSEMNGKDFSI-VVWNKIIG*PKGFGFIEFTSHAIYKRIL*P*NGTQL-----NFR 525
           SC  H+   G+  SI ++ NKI G P+G+GF+EF SHA  +RIL   NGTQ+      FR
Sbjct: 59  SCFAHT---GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFR 115

Query: 526 LKW 534
           L W
Sbjct: 116 LNW 118


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 438

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
 Frame = +2

Query: 560 PDAEHEHYIFVGDSALGVTNLV----------SVRVAKIFSDPNTAWPKEYDFVKFADK 706
           PDA  EH IFVGD A  VT+ +          SVR AK+ +DPNT   K Y FVKF+D+
Sbjct: 128 PDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186



 Score = 49.3 bits (116), Expect(2) = 2e-12
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
 Frame = +1

Query: 364 SC*FHSEMNGKDFSI-VVWNKIIG*PKGFGFIEFTSHAIYKRIL*P*NGTQL-----NFR 525
           SC  H+   G+  SI ++ NKI G P+G+GF+EF SHA  +RIL   NGTQ+      FR
Sbjct: 59  SCFAHT---GEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFR 115

Query: 526 LKW 534
           L W
Sbjct: 116 LNW 118


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