BLASTX nr result

ID: Cephaelis21_contig00013647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013647
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   162   4e-38
ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   160   1e-37
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like ...   157   9e-37

>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  162 bits (409), Expect = 4e-38
 Identities = 78/125 (62%), Positives = 97/125 (77%)
 Frame = -2

Query: 377 MAAAAVQLFIQDDQVVIANGLVQLTLTNPGGIITRIQYGGIDNLLELNNPSLNGGFWDLN 198
           M    VQL IQD+ V++ NG++Q+TL+NP GI+T IQY GI NLLE+ N   N G+WDL 
Sbjct: 1   MPLQGVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLV 60

Query: 197 WSLSGSSGTRGNFDTIEGTIFRVIVETDEQVELCFTRMWDPSLQGEHAPLSIDKRFILLR 18
           WS  GS+GT G FD I+GT F+VIVET+EQVEL FTR WDPSL+G+  PL+IDKRF++LR
Sbjct: 61  WSTPGSTGTTGIFDVIKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRFVMLR 120

Query: 17  GCSGF 3
           G SGF
Sbjct: 121 GSSGF 125


>ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|222842840|gb|EEE80387.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/125 (60%), Positives = 95/125 (76%)
 Frame = -2

Query: 377 MAAAAVQLFIQDDQVVIANGLVQLTLTNPGGIITRIQYGGIDNLLELNNPSLNGGFWDLN 198
           M+   VQL I+D  VV+ NG++Q+TL+NPGGI+T IQY GIDNLLE  +   N G+WDL 
Sbjct: 1   MSTPRVQLLIEDQHVVMDNGILQVTLSNPGGIVTGIQYNGIDNLLEALDLETNRGYWDLV 60

Query: 197 WSLSGSSGTRGNFDTIEGTIFRVIVETDEQVELCFTRMWDPSLQGEHAPLSIDKRFILLR 18
           WS +GS+GT G FD  EGT FRVIVE +EQVE+ FTR WDPSL+G+   L++DKRFI+LR
Sbjct: 61  WSQAGSTGTTGTFDVFEGTTFRVIVENEEQVEISFTRTWDPSLEGKFVSLNLDKRFIMLR 120

Query: 17  GCSGF 3
             SGF
Sbjct: 121 NSSGF 125


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/125 (62%), Positives = 98/125 (78%)
 Frame = -2

Query: 377 MAAAAVQLFIQDDQVVIANGLVQLTLTNPGGIITRIQYGGIDNLLELNNPSLNGGFWDLN 198
           M+   VQL+IQD  VV+ NG++Q+TL+NPGGI+T I+Y  IDNLLE+ N   N G+WDL 
Sbjct: 1   MSPLGVQLYIQDRHVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLV 60

Query: 197 WSLSGSSGTRGNFDTIEGTIFRVIVETDEQVELCFTRMWDPSLQGEHAPLSIDKRFILLR 18
           WS+ GS+G    FD I+GT FRVIVE +EQVE+ FTRMWDPSL+G+  PL+IDKRFI+LR
Sbjct: 61  WSVPGSAGI---FDVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLR 117

Query: 17  GCSGF 3
           G SGF
Sbjct: 118 GSSGF 122


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/125 (62%), Positives = 98/125 (78%)
 Frame = -2

Query: 377 MAAAAVQLFIQDDQVVIANGLVQLTLTNPGGIITRIQYGGIDNLLELNNPSLNGGFWDLN 198
           M+   VQL+IQD  VV+ NG++Q+TL+NPGGI+T I+Y  IDNLLE+ N   N G+WDL 
Sbjct: 1   MSPLGVQLYIQDRHVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLV 60

Query: 197 WSLSGSSGTRGNFDTIEGTIFRVIVETDEQVELCFTRMWDPSLQGEHAPLSIDKRFILLR 18
           WS+ GS+G    FD I+GT FRVIVE +EQVE+ FTRMWDPSL+G+  PL+IDKRFI+LR
Sbjct: 61  WSVPGSAGI---FDVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLR 117

Query: 17  GCSGF 3
           G SGF
Sbjct: 118 GSSGF 122


>ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 651

 Score =  157 bits (397), Expect = 9e-37
 Identities = 73/125 (58%), Positives = 97/125 (77%)
 Frame = -2

Query: 377 MAAAAVQLFIQDDQVVIANGLVQLTLTNPGGIITRIQYGGIDNLLELNNPSLNGGFWDLN 198
           MA+ AVQL ++D QVV+ NG++Q+ L+NPGG +T IQY GIDNLLE  N   N G+WD+ 
Sbjct: 1   MASQAVQLRVEDSQVVMDNGILQVYLSNPGGFVTGIQYNGIDNLLETLNEKDNRGYWDVV 60

Query: 197 WSLSGSSGTRGNFDTIEGTIFRVIVETDEQVELCFTRMWDPSLQGEHAPLSIDKRFILLR 18
           WS +GS+GT G F+ I GT F VI+E +EQVE+ FTR WDPSL+G+ APL+IDKR+++LR
Sbjct: 61  WSEAGSTGTTGTFERIVGTSFNVIMENEEQVEISFTRKWDPSLKGKRAPLNIDKRYVMLR 120

Query: 17  GCSGF 3
             +GF
Sbjct: 121 NSAGF 125


Top