BLASTX nr result

ID: Cephaelis21_contig00013627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013627
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...    85   1e-14
ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...    84   2e-14
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...    84   3e-14
dbj|BAF45348.1| nucleoporin [Lotus japonicus]                          82   7e-14
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...    82   9e-14

>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
           gi|355477434|gb|AES58637.1| Nuclear pore complex protein
           Nup85 [Medicago truncatula]
          Length = 919

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/58 (63%), Positives = 47/58 (81%)
 Frame = -3

Query: 638 ITNLDCSAFWLQCEHQKTRGGLKNMLQIMLGNSTSLSNAILQ*IELYVSHLLYIRPFM 465
           IT LDCS FW+QC++Q+TR GL+N+LQ+MLGN+ SL  A    +ELY+SH LYIRPFM
Sbjct: 349 ITKLDCSPFWIQCDNQQTRVGLRNLLQVMLGNTESLCTASCYWVELYISHFLYIRPFM 406


>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = -3

Query: 638 ITNLDCSAFWLQCEHQKTRGGLKNMLQIMLGNSTSLSNAILQ*IELYVSHLLYIRPF 468
           IT LDCS+FW+QC+H++TR GL+NMLQ+MLGN+ +L  +    IELY+SH LY+RPF
Sbjct: 317 ITKLDCSSFWVQCDHRQTREGLRNMLQLMLGNTNNLCTSTCHWIELYISHFLYVRPF 373


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -3

Query: 638 ITNLDCSAFWLQCEHQKTRGGLKNMLQIMLGNSTSLSNAILQ*IELYVSHLLYIRPF 468
           IT LDCS FW+QC++Q+TR GL+N+LQIMLGN+ SL  A    IELY+SH LYIRPF
Sbjct: 300 ITKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPF 356


>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 38/57 (66%), Positives = 45/57 (78%)
 Frame = -3

Query: 638 ITNLDCSAFWLQCEHQKTRGGLKNMLQIMLGNSTSLSNAILQ*IELYVSHLLYIRPF 468
           IT LDCS FW+QC++Q+T  GL+N+LQIMLGN+ SL  A    IELYVSH LYIRPF
Sbjct: 313 ITKLDCSPFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATCHWIELYVSHFLYIRPF 369


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
           gi|223544326|gb|EEF45847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = -3

Query: 638 ITNLDCSAFWLQCEHQKTRGGLKNMLQIMLGNSTSLSNAILQ*IELYVSHLLYIRPF 468
           +T L+ SAFW+QC+H++TR GLKNMLQIMLGN+  LS      +E+Y+SH+LYIRPF
Sbjct: 326 VTKLESSAFWVQCDHRRTREGLKNMLQIMLGNTNILSTMTCNWVEMYISHILYIRPF 382


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