BLASTX nr result
ID: Cephaelis21_contig00013587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00013587
(871 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513582.1| polypyrimidine tract binding protein, putati... 202 7e-68
gb|ABK95840.1| unknown [Populus trichocarpa] 199 1e-65
emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera] 194 9e-65
ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding prot... 194 9e-65
ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|2... 198 2e-64
>ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding
protein, putative [Ricinus communis]
Length = 447
Score = 202 bits (513), Expect(2) = 7e-68
Identities = 96/118 (81%), Positives = 103/118 (87%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGYCKLH 692
TLDVLHMVFS+FGPV KIAMFDKNGG+QALIQYPDVQTAV AKEALEGHCIYDGG+CKLH
Sbjct: 258 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 317
Query: 691 ISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQQPNAMGAPVTHPYNGVQYPP 518
ISYSRH+DLSIKVNNDRSRDYTI N M+N QPSILGQQP P HPY+G Q+ P
Sbjct: 318 ISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPTVGPPAHPYSGAQFAP 375
Score = 82.4 bits (202), Expect(2) = 7e-68
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -2
Query: 432 VPQPSVGWNSAVPTGPPPMSMQMHNHPYMPPSNIHPEMGPGMMPLHGQNGLPHSAAMPPY 253
+PQPS GW +AVP GP M QM+NHPY P + P+MGPGMM + G G+ A MPPY
Sbjct: 382 MPQPSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPPQMGPGMMQMPGHTGIQQGAPMPPY 441
Query: 252 HP 247
P
Sbjct: 442 RP 443
Score = 90.1 bits (222), Expect = 6e-16
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCI------YDG 710
++DVLH+VFS+FG V KI F+K G QAL+Q+ D +TA +AK AL+G I
Sbjct: 126 SIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYLLPEHI 185
Query: 709 GYCKLHISYSRHTDLSIKVNNDRSRDYTISNSPM 608
G C L I+YS HTDLS+K + RSRDYT N P+
Sbjct: 186 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPV 219
>gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 199 bits (507), Expect(2) = 1e-65
Identities = 96/116 (82%), Positives = 102/116 (87%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGYCKLH 692
TLDVLHMVFSSFGPV KIAMFDKNGG+QALIQYPDVQTAV AKEALEGHCIYDGG+CKLH
Sbjct: 258 TLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 317
Query: 691 ISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQQPNAMGAPVTHPYNGVQY 524
+SYSRH+DLSIKVNNDRSRDYTI N+ MMN QPSILGQQP A P H Y G Q+
Sbjct: 318 LSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVATHGPPAHTYPGAQH 373
Score = 77.4 bits (189), Expect(2) = 1e-65
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = -2
Query: 432 VPQPSVGWNSAVPTGPPPMSMQMHNHPYMPPSNIHPEMGPGMMPLHGQNGLPHSAAMPPY 253
+PQPS GW + P P M QM+N+PY+PP + P+MG GMM + GLPH+ AMPPY
Sbjct: 377 MPQPSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPPQMGHGMMQMPNHGGLPHAPAMPPY 436
Query: 252 HP 247
P
Sbjct: 437 RP 438
Score = 91.3 bits (225), Expect = 3e-16
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDG------ 710
++DVLH+VFS+FG V KI F+K G QAL+Q+ D +TA +AK AL+G I
Sbjct: 126 SIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHL 185
Query: 709 GYCKLHISYSRHTDLSIKVNNDRSRDYTISNSPM 608
G C L I+YS HTDLS+K + RSRDYT +N P+
Sbjct: 186 GPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 219
>emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 194 bits (494), Expect(2) = 9e-65
Identities = 92/116 (79%), Positives = 103/116 (88%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGYCKLH 692
TLDVLHMVFS+FGP+ KIAMFDKNGGVQALIQYPDVQTA+ AKEALEGHCIYDGG+CKLH
Sbjct: 567 TLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGGFCKLH 626
Query: 691 ISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQQPNAMGAPVTHPYNGVQY 524
ISYSRHTDLSIKVNNDRSRDYT SP++++QPS+LGQQP + P TH + G QY
Sbjct: 627 ISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQY 679
Score = 79.3 bits (194), Expect(2) = 9e-65
Identities = 38/66 (57%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -2
Query: 432 VPQPSVGW-NSAVPTGPPP-----MSMQMHNHPYMPPSNIHPEMGPGMMPLHGQNGLPHS 271
+ QPS GW SA G PP M MQ HNHPYMPP + P+ PGMMP+ Q GLP S
Sbjct: 688 IHQPSAGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMMPMQTQTGLPQS 747
Query: 270 AAMPPY 253
AAMPPY
Sbjct: 748 AAMPPY 753
Score = 87.4 bits (215), Expect = 4e-15
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCI------YDG 710
++DVLH+VFS+FG V KI F+K G QAL+Q+ D +TA AAK AL+G I
Sbjct: 435 SIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHL 494
Query: 709 GYCKLHISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQ 578
G C L I++S HTDLS+K + RSRDYT P+ ++ GQ
Sbjct: 495 GPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 538
>ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 194 bits (494), Expect(2) = 9e-65
Identities = 92/116 (79%), Positives = 103/116 (88%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGYCKLH 692
TLDVLHMVFS+FGP+ KIAMFDKNGGVQALIQYPDVQTA+ AKEALEGHCIYDGG+CKLH
Sbjct: 258 TLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGGFCKLH 317
Query: 691 ISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQQPNAMGAPVTHPYNGVQY 524
ISYSRHTDLSIKVNNDRSRDYT SP++++QPS+LGQQP + P TH + G QY
Sbjct: 318 ISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQY 370
Score = 79.3 bits (194), Expect(2) = 9e-65
Identities = 38/66 (57%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -2
Query: 432 VPQPSVGW-NSAVPTGPPP-----MSMQMHNHPYMPPSNIHPEMGPGMMPLHGQNGLPHS 271
+ QPS GW SA G PP M MQ HNHPYMPP + P+ PGMMP+ Q GLP S
Sbjct: 379 IHQPSAGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMMPMQTQTGLPQS 438
Query: 270 AAMPPY 253
AAMPPY
Sbjct: 439 AAMPPY 444
Score = 87.4 bits (215), Expect = 4e-15
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCI------YDG 710
++DVLH+VFS+FG V KI F+K G QAL+Q+ D +TA AAK AL+G I
Sbjct: 126 SIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHL 185
Query: 709 GYCKLHISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQ 578
G C L I++S HTDLS+K + RSRDYT P+ ++ GQ
Sbjct: 186 GPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 229
>ref|XP_002322027.1| predicted protein [Populus trichocarpa] gi|222869023|gb|EEF06154.1|
predicted protein [Populus trichocarpa]
Length = 447
Score = 198 bits (504), Expect(2) = 2e-64
Identities = 95/118 (80%), Positives = 102/118 (86%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDGGYCKLH 692
TLDVLHMVFSSFGPV KIAMFDKN G+QALIQYPDVQTAV AKEALEGHCIYDGG+CKLH
Sbjct: 258 TLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 317
Query: 691 ISYSRHTDLSIKVNNDRSRDYTISNSPMMNTQPSILGQQPNAMGAPVTHPYNGVQYPP 518
+SYSRH DLSIKVNNDRSRDYTI N+ M+N QPSILGQQP A P +H Y G Q+ P
Sbjct: 318 LSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVATHGPPSHLYTGAQFAP 375
Score = 74.3 bits (181), Expect(2) = 2e-64
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = -2
Query: 432 VPQPSVGWNSAVPTGPPPMSMQMHNHPYMPPSNIHPEMGPGMMPLHGQNGLPHSAAMPPY 253
+PQPS GW + P P M QM+N+PY+PP + P+MG GMM + G PH+ AMPPY
Sbjct: 382 IPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMGHGMMQMPSHGGPPHTHAMPPY 441
Query: 252 HP 247
P
Sbjct: 442 RP 443
Score = 87.4 bits (215), Expect = 4e-15
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
Frame = -1
Query: 871 TLDVLHMVFSSFGPVLKIAMFDKNGGVQALIQYPDVQTAVAAKEALEGHCIYDG------ 710
++DVLH+VFS+FG V KI F+K QAL+Q+ DV+TA +AK AL+G I
Sbjct: 126 SIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYLLPEHL 185
Query: 709 GYCKLHISYSRHTDLSIKVNNDRSRDYTISNSPM 608
G C L I+YS HTDLS+K + RSRDYT N P+
Sbjct: 186 GPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPV 219