BLASTX nr result

ID: Cephaelis21_contig00013585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013585
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arab...    77   1e-12
ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis...    76   3e-12
gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]       75   6e-12
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...    74   9e-12

>ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|222859243|gb|EEE96790.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 MLQHKITSHMGREISASTPFLFQAIRCMSS-KLFVGGLSYQMDEETLQKTFENYGQVYEA 25
           ML+   +  M  EISAS P ++QA+RCMSS KLFVGG+S+Q D+ +L++ F+ YG V EA
Sbjct: 10  MLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEA 69

Query: 24  RIILDRQT 1
           RII+DR+T
Sbjct: 70  RIIMDRET 77


>ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
           lyrata] gi|297310551|gb|EFH40975.1| hypothetical protein
           ARALYDRAFT_358310 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 MLQHKITSHMGREISASTPFLFQAIRCMSS-KLFVGGLSYQMDEETLQKTFENYGQVYEA 25
           +L+   +  +  ++S S+P LFQAIRCMSS KLF+GG++Y MDE++L++ F  YG+V E 
Sbjct: 10  ILKQTTSKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVET 69

Query: 24  RIILDRQT 1
           R+ILDR+T
Sbjct: 70  RVILDRET 77


>ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
           gi|9759450|dbj|BAB10366.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974556|gb|AAL31194.1|
           AT5g61030/maf19_30 [Arabidopsis thaliana]
           gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30
           [Arabidopsis thaliana] gi|225879144|dbj|BAH30642.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332010031|gb|AED97414.1| glycine-rich RNA-binding
           protein 3 [Arabidopsis thaliana]
          Length = 309

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 MLQHKITSHMGREISASTPFLFQAIRCMSS-KLFVGGLSYQMDEETLQKTFENYGQVYEA 25
           +L+      +  ++S S+P LFQAIRCMSS KLF+GG++Y MDE++L++ F  YG+V + 
Sbjct: 10  ILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDT 69

Query: 24  RIILDRQT 1
           R+ILDR+T
Sbjct: 70  RVILDRET 77


>gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
          Length = 339

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 MLQHKITSHMGREISASTPFLFQAIRCMSS-KLFVGGLSYQMDEETLQKTFENYGQVYEA 25
           +L+H +  +   E+SAS   LFQ IR MSS KLFVGGLSY  DE +L++TF  YG+V EA
Sbjct: 10  ILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEA 69

Query: 24  RIILDRQT 1
           R+ILDR+T
Sbjct: 70  RVILDRET 77


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 MLQHKITSHMGREISASTPFLFQAIRCMSS-KLFVGGLSYQMDEETLQKTFENYGQVYEA 25
           +L+   T  +  E+SAS P +FQAIR MSS K+FVGG+SYQ D+ +L++ F  YG+V EA
Sbjct: 10  LLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAFGKYGEVIEA 69

Query: 24  RIILDRQT 1
           R+I+DR+T
Sbjct: 70  RVIIDRET 77


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