BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012488
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp....   423   e-116
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   422   e-116
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops...   419   e-115
gb|AFK49136.1| unknown [Lotus japonicus]                              417   e-114
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   417   e-114

>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328387|gb|EFH58806.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  423 bits (1087), Expect = e-116
 Identities = 212/273 (77%), Positives = 240/273 (87%), Gaps = 1/273 (0%)
 Frame = -2

Query: 1001 MGGLSIGEKHFIKGGIAQDLRTDGRKRLSYRPIYVNTGVIPQANGSARVKMGATDVIASV 822
            M GLS+GE+HF+KGGIAQDLRTDGRKRL+YRPIYV TGVIPQANGSARVK+G TDVIASV
Sbjct: 1    MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60

Query: 821  KAELGKPSASHPDRGKVFINVECSPTAEPAFXXXXXXXXXXXXSVALQRCLLGGKSGAGA 642
            KAE+G+PS+  PD+GKV + ++CSPTAEP F            ++ALQRCLLGGKSGAGA
Sbjct: 61   KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120

Query: 641  GIDLSSLSIVGGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTALPKVQV-ASAASD 465
            GI+LSSL I  GK+CWDLYI+GLV+SSDGNLLDALGAAIKAAL+NTA+PKV V A  A D
Sbjct: 121  GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180

Query: 464  EQPEVDLSDEEYLQFDTSGIPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRQGHIC 285
            EQPE+D+SDEEYLQFDTS +PVIVTLTKVG HYIVDAT EEESQMSSAVS+SVNR GHIC
Sbjct: 181  EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240

Query: 284  GLTKRGGAGLDPSVILDMISVAKHVSEKLLNKL 186
            GLTKRGG+GLDPSVILDMISVAKHV+E L++KL
Sbjct: 241  GLTKRGGSGLDPSVILDMISVAKHVTENLMSKL 273


>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  422 bits (1085), Expect = e-116
 Identities = 219/273 (80%), Positives = 238/273 (87%), Gaps = 1/273 (0%)
 Frame = -2

Query: 1001 MGGLSIGEKHFIKGGIAQDLRTDGRKRLSYRPIYVNTGVIPQANGSARVKMGATDVIASV 822
            M GLS+GE HFI+GGIAQDLR DGRKRL+YRPI V TGVIPQ NGSARV+MGATDVIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 821  KAELGKPSASHPDRGKVFINVECSPTAEPAFXXXXXXXXXXXXSVALQRCLLGGKSGAGA 642
            KAELGKPS   PD+GKV I V+CS TAEPAF            S ALQRCLLGGKSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 641  GIDLSSLSIVGGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTALPKVQVASAAS-D 465
            GIDLSSL +V GKICWDLYI+GLVVSSDGNLLDALGAAIKAALSNT +P+VQVA+  S D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 464  EQPEVDLSDEEYLQFDTSGIPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRQGHIC 285
            E PEVD+SDEE+LQFDTS +PVIVTLTKVGRHYIVDAT EEESQMSSAVS+SVNRQGHIC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 284  GLTKRGGAGLDPSVILDMISVAKHVSEKLLNKL 186
            G+TKRGG GLDPS+ILDMISVAKHVSE+L+NKL
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKL 273


>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
           gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease
           family protein [Arabidopsis thaliana]
           gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
           [Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
           putative 3' exoribonuclease [Arabidopsis thaliana]
           gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
           thaliana] gi|332641077|gb|AEE74598.1|
           3'-5'-exoribonuclease family protein [Arabidopsis
           thaliana] gi|332641078|gb|AEE74599.1|
           3'-5'-exoribonuclease family protein [Arabidopsis
           thaliana]
          Length = 286

 Score =  419 bits (1076), Expect = e-115
 Identities = 210/271 (77%), Positives = 238/271 (87%), Gaps = 1/271 (0%)
 Frame = -2

Query: 995 GLSIGEKHFIKGGIAQDLRTDGRKRLSYRPIYVNTGVIPQANGSARVKMGATDVIASVKA 816
           GLS+GE+HFIKGGIAQDLRTDGRKRL+YRPIYV TGVIPQANGSARV++G TDVIASVKA
Sbjct: 2   GLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKA 61

Query: 815 ELGKPSASHPDRGKVFINVECSPTAEPAFXXXXXXXXXXXXSVALQRCLLGGKSGAGAGI 636
           E+G+PS+  PD+GKV + ++CSPTAEP F            ++ALQRCLLGGKSGAGAGI
Sbjct: 62  EIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAGI 121

Query: 635 DLSSLSIVGGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTALPKVQV-ASAASDEQ 459
           +LSSL I  GK+CWDLYI+GLV+SSDGNLLDALGAAIKAAL+NTA+PKV V A  A DEQ
Sbjct: 122 NLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDEQ 181

Query: 458 PEVDLSDEEYLQFDTSGIPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRQGHICGL 279
           PE+D+SDEEYLQFDTS +PVIVTLTKVG HYIVDAT EEESQMSSAVS+SVNR GHICGL
Sbjct: 182 PEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRTGHICGL 241

Query: 278 TKRGGAGLDPSVILDMISVAKHVSEKLLNKL 186
           TKR G+GLDPSVILDMISVAKHV+E L++KL
Sbjct: 242 TKRSGSGLDPSVILDMISVAKHVTETLMSKL 272


>gb|AFK49136.1| unknown [Lotus japonicus]
          Length = 286

 Score =  417 bits (1072), Expect = e-114
 Identities = 213/273 (78%), Positives = 241/273 (88%), Gaps = 1/273 (0%)
 Frame = -2

Query: 1001 MGGLSIGEKHFIKGGIAQDLRTDGRKRLSYRPIYVNTGVIPQANGSARVKMGATDVIASV 822
            M GLS+GE+HFI+GGIAQDLR DGRKRL+YRPIYV TGVIPQA+GSAR++MGAT+VIASV
Sbjct: 1    MVGLSLGERHFIQGGIAQDLRCDGRKRLTYRPIYVETGVIPQAHGSARIRMGATEVIASV 60

Query: 821  KAELGKPSASHPDRGKVFINVECSPTAEPAFXXXXXXXXXXXXSVALQRCLLGGKSGAGA 642
            KAELGKPS   PD+GKV I ++CS TAEPAF            SVALQR LLG KSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDDLSAELSVALQRSLLGAKSGAGA 120

Query: 641  GIDLSSLSIVGGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTALPKVQVASAAS-D 465
            GIDLSSL +V GKICWDLYI+GLVVSSDGNLLDALGAAIKAALSNT +P+VQVA+ AS D
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 464  EQPEVDLSDEEYLQFDTSGIPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRQGHIC 285
            E+PEV++SD+E+LQFDTSG+PVIVTLTKVGRH IVDAT EEESQMSSAVS+SVNRQGHIC
Sbjct: 181  EKPEVEISDDEFLQFDTSGVPVIVTLTKVGRHSIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 284  GLTKRGGAGLDPSVILDMISVAKHVSEKLLNKL 186
            G+TKRG  GLDPS++LDMISVAKHVSE+L+NKL
Sbjct: 241  GITKRGSVGLDPSIVLDMISVAKHVSEQLINKL 273


>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
            gi|296082105|emb|CBI21110.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  417 bits (1071), Expect = e-114
 Identities = 217/273 (79%), Positives = 237/273 (86%), Gaps = 1/273 (0%)
 Frame = -2

Query: 1001 MGGLSIGEKHFIKGGIAQDLRTDGRKRLSYRPIYVNTGVIPQANGSARVKMGATDVIASV 822
            M GLS+GEKHFI+GGIAQDLRTDGR+RL+YRP  V TGVIPQANGSARV++G TDVIASV
Sbjct: 1    MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60

Query: 821  KAELGKPSASHPDRGKVFINVECSPTAEPAFXXXXXXXXXXXXSVALQRCLLGGKSGAGA 642
            KAELGKPS S PD+GKV I V+CSPTA P F            S ALQ CLLGGKSGAGA
Sbjct: 61   KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120

Query: 641  GIDLSSLSIVGGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTALPKVQVASAAS-D 465
            GIDLSSL +V GK+CWDLYI+GLVVSSDGNLLDALGAAIKAAL+NT +PKV+VA  AS D
Sbjct: 121  GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180

Query: 464  EQPEVDLSDEEYLQFDTSGIPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRQGHIC 285
              PEVD+SD+EYLQFDTSG+PVIVTLTKVGRHYIVDATLEEESQMSSAVSVSV+ QG IC
Sbjct: 181  GLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVSGQGRIC 240

Query: 284  GLTKRGGAGLDPSVILDMISVAKHVSEKLLNKL 186
            GL KRGGAGLDPSVILDMISVAKHVSE+L+NKL
Sbjct: 241  GLIKRGGAGLDPSVILDMISVAKHVSEQLMNKL 273