BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012484
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    83   5e-25
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    84   1e-20
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   4e-20
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   4e-20
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    77   1e-19

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 82.8 bits (203), Expect(2) = 5e-25
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
 Frame = -2

Query: 476  DGFNSRFFQSC*YIVGEAVVAAVQAFFCGHSLPRGYSATLLALIPKSPNPQNFSDFRPIS 297
            DG  + F+++C  +VGE V   V     G ++P G++   + LIPK   P+   D RPIS
Sbjct: 705  DGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPIS 764

Query: 296  LYNVAYXXXXXXXXXXXXXIPPHITSPSQSGFVQ----------*IDIE*YSFSSRTGGA 147
            L NV Y             I P + SP+QS FV             ++  Y  + R+G  
Sbjct: 765  LCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSG-- 822

Query: 146  SKFQYQRGNTVLKLYMAKSYDQVSWIYLISVMRKFGFREIWLHMIWR 6
                 Q G    KL M+K+YD+V W +L  ++ K GF   W+++I +
Sbjct: 823  -----QVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMK 864



 Score = 58.5 bits (140), Expect(2) = 5e-25
 Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
 Frame = -3

Query: 991  WSKNDIGDIFEELKKAEDEMERLEELVQSSYSDTILFQLNEAKAKRIHQTNQVTEFWRQK 812
            WS N +GD+ + +KK + E+E        S    +  ++   + +++ Q  QV  +W+Q+
Sbjct: 539  WSSNVLGDLEKRVKKVKKELETCRRQ-PISRDQVVREEVLRYRLEKLEQ--QVDIYWKQR 595

Query: 811  ARAKWLAKGIQIPNIF-ILM*KQKDSERLKRIRDVSNNWVEGSDDIAMASIDFFSKLLKE 635
            A   WL KG +  + F     +++   R+ ++R    +WVE  +D     I+FF +L   
Sbjct: 596  AHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTS 655

Query: 634  KRGYNVAFSSKLHKALECIPKLITESDNSLL*GVPLAEEIHQIVSAL 494
              G N        K L+ + + ++ + N  L      EE+ + + A+
Sbjct: 656  NGGQN------SQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAI 696


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 83.6 bits (205), Expect(2) = 1e-20
 Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
 Frame = -2

Query: 476 DGFNSRFFQSC*YIVGEAVVAAVQAFFCGHSLPRGYSATLLALIPKSPNPQNFSDFRPIS 297
           +GF   F+Q+   IVG  V+ +VQ FF    L +  ++ L+ LIPK P  +   D+RPI+
Sbjct: 463 NGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIA 522

Query: 296 LYNVAYXXXXXXXXXXXXXIPPHITSPSQSGFVQ*IDIE*YSF--SSRTGGASKFQYQRG 123
           L N  +             I   I S  Q GF++  DI       S       K QY  G
Sbjct: 523 LANFQFKIISKILADRLADITMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQY-GG 581

Query: 122 NTVLKLYMAKSYDQVSWIYLISVMRKFGFREIWLHMI 12
           N  LK+ +AK++D + W +L++V+++FGF E ++H I
Sbjct: 582 NVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWI 618



 Score = 43.1 bits (100), Expect(2) = 1e-20
 Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
 Frame = -3

Query: 991 WSKNDIGDIFEELKKAEDEMERLEELVQS-SYSDTILFQLNEAKAKRIHQTNQVTEFWRQ 815
           W++   GD+  +++ A +E+ R+++++ S  +SD +  Q  EA        +   E WR+
Sbjct: 293 WNRTVFGDVDRKVRMAVEEVNRIQQIIDSVGFSDQLYAQELEAHLILTKALHYQDELWRE 352

Query: 814 KARAKWLAKGIQIPNIFILM*KQKDSERLKRIRDVSNNWVEGSDDIAMASIDFFSKLLKE 635
           K R +    G +    F  + K + ++         +  +     I +  +++F  +   
Sbjct: 353 KLRDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGDAVITDPARIEVHVLNYFQAIFSV 412

Query: 634 KRGYNVAFSSKLHKALECIPKLITESDNSLL*GVPLAEEIHQIVSALDPD 485
               N    + L   ++ IP L++  DN+ L  +PL  E+   V  L+ D
Sbjct: 413 D---NSCIQNDL--VVDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGD 457


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 77.8 bits (190), Expect(2) = 4e-20
 Identities = 47/155 (30%), Positives = 74/155 (47%)
 Frame = -2

Query: 476 DGFNSRFFQSC*YIVGEAVVAAVQAFFCGHSLPRGYSATLLALIPKSPNPQNFSDFRPIS 297
           DGFN +F +    ++ E V   V  F+    LPRG +  L+ALIPK  NP+ F DFRPIS
Sbjct: 449 DGFNFKFVKQAWEVIKEDVYGIVNEFWHSSRLPRGCNTALIALIPKISNPEGFKDFRPIS 508

Query: 296 LYNVAYXXXXXXXXXXXXXIPPHITSPSQSGFVQ*IDIE*YSFSSRTGGASKFQYQRGNT 117
           +    Y             +  ++  P QS F++   I   +  +     S  + ++   
Sbjct: 509 MVGCVYKIISKILARRLQQVMGYLVGPHQSSFIKGRQILDGALIAGEVIDSCKKNKKEAI 568

Query: 116 VLKLYMAKSYDQVSWIYLISVMRKFGFREIWLHMI 12
           +LKL   K++D VSW ++   +R+  F + W   I
Sbjct: 569 ILKLDFHKAFDSVSWEFIDWTLRQMNFPKKWCKWI 603



 Score = 47.0 bits (110), Expect(2) = 4e-20
 Identities = 37/184 (20%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
 Frame = -3

Query: 994 RWSKNDIGDIFEELKKAEDEMERLEELVQSSYSDTILFQLNEAKAKRIHQTN------QV 833
           +W+  + G I E+++  E++++ ++ +     +D    + NE + +R  Q +      + 
Sbjct: 280 KWNAEEFGCIDEKIQSLENKIQEMDRI-----ADDRNLEANELEERRKSQMDLWIWMKRK 334

Query: 832 TEFWRQKARAKWLAKGIQIPNIFILM*KQKDSERLKRIRDVSNNWVEGSDDIAMASIDFF 653
              W Q++R KW+ +G +    F +M   +  +       +    ++  +D+  A++ +F
Sbjct: 335 EVLWAQQSRVKWIKEGDRNTRYFHIMATMRRKKNAIESLIIEQKQIDSPEDLKAAAVSYF 394

Query: 652 SKLLKEKRGYNVAFSSKLHKALECIPKLITESDNSLL*GVPLAEEIHQIVSALD------ 491
           S+L  E+      F     K L        +S   +L       EI + VS+ D      
Sbjct: 395 SELFTEELSPRPVFGDLNFKQL-------NDSHREILTSQFTRSEIDEAVSSCDGSKSPG 447

Query: 490 PDNF 479
           PD F
Sbjct: 448 PDGF 451


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 75.9 bits (185), Expect(2) = 4e-20
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
 Frame = -2

Query: 500 CSGPG*FSDGFNSRFFQSC*YIVGEAVVAAVQAFFCGHSLPRGYSATLLALIPKSPNPQN 321
           C  PG   DG ++ F+Q   +I+G+ V   V +   G   P   + T +ALIPK  NP  
Sbjct: 447 CKAPG--PDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNPTT 504

Query: 320 FSDFRPISLYNVAYXXXXXXXXXXXXXIPPHITSPSQSGFVQ---*IDIE*YSFSSRTGG 150
            ++FRPI+L NV Y               P + S +QS FV      D    +       
Sbjct: 505 PAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSM 564

Query: 149 ASKFQYQRGNTVLKLYMAKSYDQVSWIYLISVMRKFGFREIWLHMI 12
             + + ++G   +KL M+K+YD+V W +L  ++   GF   W+++I
Sbjct: 565 KHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLI 610



 Score = 48.9 bits (115), Expect(2) = 4e-20
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
 Frame = -3

Query: 991 WSKNDIGDIFEELKKAEDEMERLEELVQSSYSDTILFQLNEAKAKRIHQTNQVTEFWRQK 812
           WS    G+I ++L + E ++ RL++   SS +      L E K   +H   +    W  +
Sbjct: 285 WSSEKGGNIGKQLGRVESDLCRLQQQPISSANCEARLTL-EKKLDELHAKQEAR--WYLR 341

Query: 811 ARAKWLAKGIQIPNIFILM*KQKDSERLKR-----IRDVSNNWVEGSDDIAMASIDFFSK 647
           +RA  +  G +    F      K S+R KR     + D S  W E  DDI     D+F+ 
Sbjct: 342 SRAMEVRDGDRNTKYF----HHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTS 397

Query: 646 LLKEKRGYNVAFSSKLHKALECIPKLITESDNSLL*GVPLAEEIHQIVSALDP 488
           +       +V    +L+  L C+  ++TE  N+ L      EE++  +S + P
Sbjct: 398 IFTSTNPSDV----QLNDVLCCVDPVVTEECNTWLLKPFSKEELYVALSQMHP 446


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score = 76.6 bits (187), Expect(2) = 1e-19
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
 Frame = -2

Query: 479  SDGFNSRFFQSC*YIVGEAVVAAVQAFFCGHSLPRGYSATLLALIPKSPNPQNFSDFRPI 300
            SDG  + F++     VG+ +V  V+ F  G  +P  ++ T++ LIPK PNP+   D RPI
Sbjct: 905  SDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPI 964

Query: 299  SLYNVAYXXXXXXXXXXXXXIPPHITSPSQSGFV---Q*IDIE*YSFSSRTGGASKFQYQ 129
            SL NV Y             +   I SP Q  FV      D    ++       +K +  
Sbjct: 965  SLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKRRGS 1024

Query: 128  RGNTVLKLYMAKSYDQVSWIYLISVMRKFGFREIWLHMIWR 6
             G   +K  M+K+YD+V W +L  +M K GF   W+ ++ +
Sbjct: 1025 VGFAAVKQGMSKAYDRVEWGFLEKMMLKLGFDRNWVFIVMK 1065



 Score = 47.0 bits (110), Expect(2) = 1e-19
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
 Frame = -3

Query: 991  WSKNDIGDIFEELKKAEDEMERLEELVQSSYSDTILFQLNEAKAK-RIHQTNQVTE-FWR 818
            WSKN +GD+ + +KKA+  +E       SS + +      EA  K R+ +  +  E +WR
Sbjct: 739  WSKNFLGDLEKRIKKAKQALEAHRRSPISSSTAS-----REAVLKYRLDKLEEQRELYWR 793

Query: 817  QKARAKWLAKGIQIPNIFILM*KQKDSERLKR--IRDVSNNWVEGSDDIAMASIDFFSKL 644
            Q+A   WL KG +    F     +  SER KR  I+ +  +  E   D A  S+   S+ 
Sbjct: 794  QRANQHWLEKGDRNTKFF----HECASERKKRNKIKKLRRDDGEVITDEA-GSLSLISEF 848

Query: 643  LKEKRGYNVAFSSKLHKALECIPKLITESDNSLL*GVPLAEEIHQIVSAL 494
             K+   +       L + L+ +PK +T + N  L      EEI + + ++
Sbjct: 849  YKQL--FTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSI 896