BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012412
         (1515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...   317   5e-84
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   313   8e-83
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...   311   2e-82
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   309   1e-81
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   304   5e-80

>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
            Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
            precursor - common tobacco gi|20005|emb|CAA37879.1|
            unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score =  317 bits (812), Expect = 5e-84
 Identities = 156/217 (71%), Positives = 184/217 (84%)
 Frame = +3

Query: 636  SQSTEASRLYVGNLPYSMTSSQLFDVFSDSGRVASVEIVYDRVTDRSRGFAFVTMGSHEE 815
            S+S E  RLYVGNLP+SMTSSQL ++F+++G VA+VEIVYDRVTDRSRGFAFVTMGS EE
Sbjct: 108  SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEE 167

Query: 816  AKETIRLFDGSQVGGRTVKVNFPEVPRGGEREVMEPKIRSSYQSYVDSPYKIYAGNLYWG 995
            AKE IRLFDGSQVGGRTVKVNFPEVPRGGEREVM  KIRS+YQ +VDSP+K+Y  NL W 
Sbjct: 168  AKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWA 227

Query: 996  LTSQGLREAFQDQPGFLSAKVLYDRGAGRSRGFGFVSFSTAEEADSALDAMNGVELEGRP 1175
            LTSQGLR+AF DQPGF+SAKV+YDR +GRSRGFGF++FS+AE  +SALD MN VELEGRP
Sbjct: 228  LTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRP 287

Query: 1176 LRLNFAQQKPAESPPPALEANSEPES*SSQMISGFST 1286
            LRLN A QK   S PP +E + E +S +S+++S  S+
Sbjct: 288  LRLNVAGQKAPVSSPPVVETSPENDSDNSELLSSLSS 324


>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
            vinifera]
          Length = 311

 Score =  313 bits (802), Expect = 8e-83
 Identities = 162/220 (73%), Positives = 185/220 (84%), Gaps = 2/220 (0%)
 Frame = +3

Query: 633  VSQSTEASRLYVGNLPYSMTSSQLFDVFSDSGRVASVEIVYDRVTDRSRGFAFVTMGSHE 812
            VS S EASRLYVGNLPYSMTSSQL DVF+++G V SVEIVYDRVTDRSRGFAFVTMGS +
Sbjct: 96   VSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQ 155

Query: 813  EAKETIRLFDGSQVGGRTVKVNFPEVPRGGEREVMEPKIRSSYQSYVDSPYKIYAGNLYW 992
            EAKE IR+FDGSQVGGRTVKVNFPEVPRGGER VM PKIRSSY+ +VDSPYKIYAGNL W
Sbjct: 156  EAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSW 215

Query: 993  GLTSQGLREAFQDQPGFLSAKVLYDRGAGRSRGFGFVSFSTAEEADSALDAMNGVELEGR 1172
             LTS+GLR+AF D PG L AKV+Y+R +GRSRGFGF+SF++AE A+SAL+AMN VE+EGR
Sbjct: 216  RLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGR 275

Query: 1173 PLRLNFA--QQKPAESPPPALEANSEPES*SSQMISGFST 1286
            PLRLN A  +  PA SP P LE N +    +S++IS  ST
Sbjct: 276  PLRLNLAAVRAPPAPSPGPGLERNVD----NSELISSIST 311


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score =  311 bits (798), Expect = 2e-82
 Identities = 154/217 (70%), Positives = 182/217 (83%)
 Frame = +3

Query: 636  SQSTEASRLYVGNLPYSMTSSQLFDVFSDSGRVASVEIVYDRVTDRSRGFAFVTMGSHEE 815
            S+S E  RLYVGNLP+SMTSSQL ++F+++G VA+VEIVYDRVTDRSRGFAFVTMGS EE
Sbjct: 103  SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEE 162

Query: 816  AKETIRLFDGSQVGGRTVKVNFPEVPRGGEREVMEPKIRSSYQSYVDSPYKIYAGNLYWG 995
            AKE IRLFDGSQVGGRTVKVNFPEVPRGGEREVM  KIRS+YQ +VDSP+K+Y  NL W 
Sbjct: 163  AKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWA 222

Query: 996  LTSQGLREAFQDQPGFLSAKVLYDRGAGRSRGFGFVSFSTAEEADSALDAMNGVELEGRP 1175
            LTSQGLR+AF DQPGF+SAKV+YDR +GRSRGFGF++FS+AE   SALD MN VELEGRP
Sbjct: 223  LTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRP 282

Query: 1176 LRLNFAQQKPAESPPPALEANSEPES*SSQMISGFST 1286
            LRLN A QK   S P  +E + E +S +++++S  S+
Sbjct: 283  LRLNVAGQKAPLSSPSVVETSPENDSENNELLSSLSS 319



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 34/98 (34%), Positives = 55/98 (56%)
 Frame = +3

Query: 903  EREVMEPKIRSSYQSYVDSPYKIYAGNLYWGLTSQGLREAFQDQPGFLSAKVLYDRGAGR 1082
            E E +E K  S     V+   ++Y GNL + +TS  L E F +     + +++YDR   R
Sbjct: 90   EEEEIEEKEESVESESVEGG-RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDR 148

Query: 1083 SRGFGFVSFSTAEEADSALDAMNGVELEGRPLRLNFAQ 1196
            SRGF FV+  + EEA  A+   +G ++ GR +++NF +
Sbjct: 149  SRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPE 186


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  309 bits (792), Expect = 1e-81
 Identities = 160/220 (72%), Positives = 184/220 (83%), Gaps = 2/220 (0%)
 Frame = +3

Query: 633  VSQSTEASRLYVGNLPYSMTSSQLFDVFSDSGRVASVEIVYDRVTDRSRGFAFVTMGSHE 812
            VS S EASRLYVGNLPYSMTSSQL  VF+++G V SVEIVYDRVTDRSRGFAFVTMGS +
Sbjct: 239  VSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQ 298

Query: 813  EAKETIRLFDGSQVGGRTVKVNFPEVPRGGEREVMEPKIRSSYQSYVDSPYKIYAGNLYW 992
            EAKE IR+FDGSQVGGRTVKVNFPEVPRGGER VM PKIRSSY+ +VDSPYKIYAGNL W
Sbjct: 299  EAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSW 358

Query: 993  GLTSQGLREAFQDQPGFLSAKVLYDRGAGRSRGFGFVSFSTAEEADSALDAMNGVELEGR 1172
             LTS+GLR+AF D PG L AKV+Y+R +GRSRGFGF+SF++AE A+SAL+AM+ VE+EGR
Sbjct: 359  RLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGR 418

Query: 1173 PLRLNFA--QQKPAESPPPALEANSEPES*SSQMISGFST 1286
            PLRLN A  +  PA SP P LE N +    +S++IS  ST
Sbjct: 419  PLRLNLAAVRAPPAPSPGPGLERNVD----NSELISSIST 454


>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 314

 Score =  304 bits (778), Expect = 5e-80
 Identities = 171/295 (57%), Positives = 206/295 (69%), Gaps = 4/295 (1%)
 Frame = +3

Query: 414  KPISSSKLKPHHDFVKSAPFSL----LSRSPFICALAAFDGFDASQTAKPLXXXXXTATX 581
            +PIS    KP    +KS  F+L    L R P     AAFDGF+ +Q              
Sbjct: 32   RPISQ---KPFTLNLKSQSFTLSFFPLHRLP--PPSAAFDGFEVAQDTTEFQQDEPETEP 86

Query: 582  XXXXXXXXXXXXXXXXSVSQSTEASRLYVGNLPYSMTSSQLFDVFSDSGRVASVEIVYDR 761
                             VS S +A RLYVGNLPYS+T+S L ++F ++G VASVEI+YDR
Sbjct: 87   VEKTEQEEEQ------KVSDSYDAGRLYVGNLPYSITNSALAELFGEAGTVASVEIMYDR 140

Query: 762  VTDRSRGFAFVTMGSHEEAKETIRLFDGSQVGGRTVKVNFPEVPRGGEREVMEPKIRSSY 941
            VTDRSRGFAFVTMG+ E+AKE IR+FDGSQVGGRTVKVNFPEVP+GGER VM  KIR+SY
Sbjct: 141  VTDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRNSY 200

Query: 942  QSYVDSPYKIYAGNLYWGLTSQGLREAFQDQPGFLSAKVLYDRGAGRSRGFGFVSFSTAE 1121
            + +VDSP+KIYAGNL WGLTSQGLREAF +QPG LSAKV+Y+R +GRSRGFGFVSF TAE
Sbjct: 201  RGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAE 260

Query: 1122 EADSALDAMNGVELEGRPLRLNFAQQKPAESPPPALEANSEPES*SSQMISGFST 1286
             A +ALD MNGVE++GRPLRLN A+ + A S PP ++ N      SS+++S  ST
Sbjct: 261  SAQAALDIMNGVEVQGRPLRLNLAEAR-APSSPPVIQKNVGSNVESSELVSSAST 314