BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012358
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   160   2e-66
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              160   2e-66
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   137   4e-60
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   142   3e-56
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]            136   2e-54

>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  160 bits (406), Expect(2) = 2e-66
 Identities = 74/136 (54%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = -2

Query: 1297 KPWSRVHLSPPAVNKKPAEFSTEELENQLFQLFMEAR-KPSFNMALAADSWLAFMDRLLI 1121
            +PW R   +    +K+P +FS +ELE++LFQLF+  R + S  + +AAD+WL FMDRLL 
Sbjct: 669  EPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLT 728

Query: 1120 LGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPQDLRAERFPHHMEKPSSYNST 941
            L DDC+ EK+ L+ KML+L D+YYDALDAPKSG K+N+ ++L+AE+FPH M + SSY+ST
Sbjct: 729  LRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHST 788

Query: 940  SVLGEIYDKVQAFESE 893
            S+LG+IYD V++F+ E
Sbjct: 789  SILGQIYDAVESFQPE 804



 Score =  119 bits (299), Expect(2) = 2e-66
 Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
 Frame = -3

Query: 786  DIWKLPCFSAE-VPQKYVSLWTIRYKDYRRQMTAALKGDNDESRSKAADEVIKNFKQVLY 610
            +IW+LP F+ + VPQ  +  W  RY  YR +M AAL+    E++ + A EVI  +KQ+LY
Sbjct: 810  EIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQ-HGGETKDEYAAEVINKYKQILY 868

Query: 609  EAADLEESQKDVPEIYFEALAIYHVTYNYAIKFKDVRKCGFAWKVAGSALLTIYAMSRNE 430
             AA+ EES +++ +I+ EALAIYHVTY + I    V  C F W+VAG AL  +Y +   E
Sbjct: 869  GAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGE 928

Query: 429  KVIAVSPSILREVF 388
            K +   PS+LR+VF
Sbjct: 929  KSMVCVPSVLRQVF 942


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  160 bits (406), Expect(2) = 2e-66
 Identities = 74/136 (54%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = -2

Query: 1297 KPWSRVHLSPPAVNKKPAEFSTEELENQLFQLFMEAR-KPSFNMALAADSWLAFMDRLLI 1121
            +PW R   +    +K+P +FS +ELE++LFQLF+  R + S  + +AAD+WL FMDRLL 
Sbjct: 655  EPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLT 714

Query: 1120 LGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPQDLRAERFPHHMEKPSSYNST 941
            L DDC+ EK+ L+ KML+L D+YYDALDAPKSG K+N+ ++L+AE+FPH M + SSY+ST
Sbjct: 715  LRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHST 774

Query: 940  SVLGEIYDKVQAFESE 893
            S+LG+IYD V++F+ E
Sbjct: 775  SILGQIYDAVESFQPE 790



 Score =  119 bits (299), Expect(2) = 2e-66
 Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
 Frame = -3

Query: 786  DIWKLPCFSAE-VPQKYVSLWTIRYKDYRRQMTAALKGDNDESRSKAADEVIKNFKQVLY 610
            +IW+LP F+ + VPQ  +  W  RY  YR +M AAL+    E++ + A EVI  +KQ+LY
Sbjct: 796  EIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQ-HGGETKDEYAAEVINKYKQILY 854

Query: 609  EAADLEESQKDVPEIYFEALAIYHVTYNYAIKFKDVRKCGFAWKVAGSALLTIYAMSRNE 430
             AA+ EES +++ +I+ EALAIYHVTY + I    V  C F W+VAG AL  +Y +   E
Sbjct: 855  GAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGE 914

Query: 429  KVIAVSPSILREVF 388
            K +   PS+LR+VF
Sbjct: 915  KSMVCVPSVLRQVF 928


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  137 bits (344), Expect(2) = 4e-60
 Identities = 69/146 (47%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
 Frame = -2

Query: 1297 KPWSRVHLSPPAVNKKPAEFSTEELENQLFQLFMEAR-KPSFNMALAADSWLAFMDRLLI 1121
            +PW     +    NKKP EFS +ELEN+LF+LF+  R +PS+  ++AAD+WLA MD+ L+
Sbjct: 783  EPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLM 842

Query: 1120 LGDDCAKEKDALREKMLKLVDLYYDALDAP-KSGKKINIPQDLRAERFPHHMEK-PSSYN 947
            LG++  +E++ +R K+L+L+++YYDALDAP K GKKI +P+ L+A   PH ME+  +SY 
Sbjct: 843  LGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYV 902

Query: 946  STSVLGEIYDKVQAFESEEHCIGVLK 869
            STS+LG+I+D    ++ E   I V K
Sbjct: 903  STSILGQIFDTANMYQEEVPNIEVQK 928



 Score =  122 bits (306), Expect(2) = 4e-60
 Identities = 60/134 (44%), Positives = 90/134 (67%)
 Frame = -3

Query: 789  LDIWKLPCFSAEVPQKYVSLWTIRYKDYRRQMTAALKGDNDESRSKAADEVIKNFKQVLY 610
            +++ KLPCF  E+P+     W   Y+ YR+ M  A++ D D +++ AA+  IK +K++LY
Sbjct: 924  IEVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAMQLDPD-AKNIAAEATIKKYKEILY 982

Query: 609  EAADLEESQKDVPEIYFEALAIYHVTYNYAIKFKDVRKCGFAWKVAGSALLTIYAMSRNE 430
             A +LE S +   E+Y EALAIY VTY++A+  + VR CGFAWKVAGSAL  +YA+  +E
Sbjct: 983  GAEELEGSPRSNEEVYQEALAIYQVTYDHAMS-RSVRNCGFAWKVAGSALFKLYAIKHSE 1041

Query: 429  KVIAVSPSILREVF 388
            +     PS++RE+F
Sbjct: 1042 RSFHCLPSVMREIF 1055


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  142 bits (358), Expect(2) = 3e-56
 Identities = 71/140 (50%), Positives = 104/140 (74%), Gaps = 4/140 (2%)
 Frame = -2

Query: 1297 KPWSRVHLSPPAVN---KKPAEFSTEELENQLFQLFMEARKPSFNM-ALAADSWLAFMDR 1130
            +PW  V L+PP+ +   + P++ S EELE +LF++F++A   + N+  +AADSWL  MDR
Sbjct: 708  EPW--VSLTPPSKSNSGRAPSQLSPEELEEELFEMFLKAGFHASNVIGIAADSWLTIMDR 765

Query: 1129 LLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPQDLRAERFPHHMEKPSSY 950
            LLILGD+ A+EK  +++KMLKL+D+YYDALDAPK G K+ +P +LR + FPH+ME+   +
Sbjct: 766  LLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDKVYLPNELRPDIFPHYMEREKKF 825

Query: 949  NSTSVLGEIYDKVQAFESEE 890
             STS+LG IYD V++  +EE
Sbjct: 826  KSTSILGLIYDFVKSQTTEE 845



 Score =  104 bits (259), Expect(2) = 3e-56
 Identities = 59/135 (43%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
 Frame = -3

Query: 786  DIWKLPCFSAE-VPQKYVSLWTIRYKDYRRQMTAALKGDNDESRSKAADEVIKNFKQVLY 610
            +I KLPCF  E V + ++      Y +YR +MT A+K D DES    A+EVI+ +KQ  Y
Sbjct: 851  EISKLPCFEDEPVSEFHMEKCRRWYDNYRSEMTQAMKTDKDES----ANEVIQRYKQEFY 906

Query: 609  EAADLEESQKDVPEIYFEALAIYHVTYNYAIKFKDVRKCGFAWKVAGSALLTIYAMSR-N 433
             AA  E+S+K + E+Y +AL +Y + Y+YAI    V KCGF WKVAG  L   Y M +  
Sbjct: 907  GAAGFEDSKKSLEELYPQALTLYKIVYDYAI-HAGVSKCGFVWKVAGPVLCRFYLMKKMQ 965

Query: 432  EKVIAVSPSILREVF 388
            EK +  +PS+L+E++
Sbjct: 966  EKSLVCAPSVLKELW 980


>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
          Length = 929

 Score =  136 bits (342), Expect(2) = 2e-54
 Identities = 68/140 (48%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
 Frame = -2

Query: 1297 KPWSRVHLSPPAVN---KKPAEFSTEELENQLFQLFMEARKPSFNM-ALAADSWLAFMDR 1130
            +PW  V L+PP+ +   + P++ S EELE +LF++F+ A   + N+  +AADSWL  MDR
Sbjct: 624  EPW--VSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDR 681

Query: 1129 LLILGDDCAKEKDALREKMLKLVDLYYDALDAPKSGKKINIPQDLRAERFPHHMEKPSSY 950
             LILGDD A+EK  +++KML+L+D+YYDALDAPK G K+ +P  L+ + FPH+ME+   +
Sbjct: 682  FLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKF 741

Query: 949  NSTSVLGEIYDKVQAFESEE 890
             STS+LG I+D V++  +EE
Sbjct: 742  QSTSILGLIFDFVKSQTTEE 761



 Score =  103 bits (258), Expect(2) = 2e-54
 Identities = 59/136 (43%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = -3

Query: 789  LDIWKLPCFSAE-VPQKYVSLWTIRYKDYRRQMTAALKGDNDESRSKAADEVIKNFKQVL 613
            L+I KLPCF  E V + ++    + Y +YR +MT A+K D DES    A+EVI+ +KQ  
Sbjct: 798  LEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTDKDES----ANEVIQRYKQEF 853

Query: 612  YEAADLEESQKDVPEIYFEALAIYHVTYNYAIKFKDVRKCGFAWKVAGSALLTIYAMSR- 436
            Y AA  E+S+K + E+Y +ALA+Y + Y+YAI    V KC F WKVAG  L   Y   + 
Sbjct: 854  YGAAGFEDSKKSLEELYPQALALYKIVYDYAI-HAGVSKCRFVWKVAGPVLCRFYLNKKM 912

Query: 435  NEKVIAVSPSILREVF 388
             EK +  +PS+L+E++
Sbjct: 913  QEKCLVCAPSVLKELW 928